Detailed information of g655.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047129174.1, protein dopey-1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5JWR5Protein DOP1A OS=Homo sapiens OX=9606 GN=DOP1A PE=1 SV=1
A1ZBE8Protein DOP1 homolog OS=Drosophila melanogaster OX=7227 GN=CG15099 PE=1 SV=1
Q292H2Protein DOP1 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA13490 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01250Ribosomal_S6Ribosomal protein S6DomainInterproscan
PF01866Diphthamide_synPutative diphthamide synthesis proteinFamilyInterproscan
PF00571CBSCBS domainDomainInterproscan
PF03471CorC_HlyCTransporter associated domainDomainInterproscan
PF00579tRNA-synt_1btRNA synthetases class I (W and Y)FamilyInterproscan
PF02762Cbl_N3CBL proto-oncogene N-terminus, SH2-like domainDomainInterproscan
PF02262Cbl_NCBL proto-oncogene N-terminal domain 1DomainInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF02761Cbl_N2CBL proto-oncogene N-terminus, EF hand-like domainDomainInterproscan
PF00616RasGAPGTPase-activator protein for Ras-like GTPaseFamilyInterproscan
PF00612IQIQ calmodulin-binding motifMotifInterproscan
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000529FamilySmall ribosomal subunit protein bS6Interproscan
IPR035980Homologous_superfamilySmall ribosomal subunit protein bS6 superfamilyInterproscan
IPR014717Homologous_superfamilyTranslation elongation factor EF1B/small ribosomal subunit protein bS6Interproscan
IPR020814FamilySmall ribosomal subunit protein bS6, plastid/chloroplastInterproscan
IPR042265Homologous_superfamilyDiphthamide synthesis DPH1/DPH2, domain 3Interproscan
IPR016435FamilyDiphthamide synthesis DPH1/DPH2Interproscan
IPR040314FamilyProtein dopeyInterproscan
IPR005170DomainTransporter-associated domainInterproscan
IPR046342Homologous_superfamilyCBS domain superfamilyInterproscan
IPR016169Homologous_superfamilyFAD-binding, type PCMH, subdomain 2Interproscan
IPR000644DomainCBS domainInterproscan
IPR036318Homologous_superfamilyFAD-binding, type PCMH-like superfamilyInterproscan
IPR044751DomainIon transporter-like, CBS domainInterproscan
IPR002307FamilyTyrosine-tRNA ligaseInterproscan
IPR002305FamilyAminoacyl-tRNA synthetase, class IcInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR036986Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan
IPR024088FamilyTyrosine-tRNA ligase, bacterial-typeInterproscan
IPR014742DomainAdaptor protein Cbl, SH2-like domainInterproscan
IPR003153DomainAdaptor protein Cbl, N-terminal helicalInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR036537Homologous_superfamilyAdaptor protein Cbl, N-terminal domain superfamilyInterproscan
IPR024159DomainAdaptor protein Cbl, PTB domainInterproscan
IPR024162FamilyAdaptor protein CblInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR014741DomainAdaptor protein Cbl, EF hand-likeInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR001936DomainRas GTPase-activating domainInterproscan
IPR023152Conserved_siteRas GTPase-activating protein, conserved siteInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR000048Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR028750FamilyCentrosome-associated protein 350/Coiled-coil domain-containing protein 187Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21011MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6Interproscan
PTHR10762DIPHTHAMIDE BIOSYNTHESIS PROTEINInterproscan
PTHR14042DOPEY-RELATEDInterproscan
PTHR22777HEMOLYSIN-RELATEDInterproscan
PTHR11766TYROSYL-TRNA SYNTHETASEInterproscan
PTHR23007CBLInterproscan
PTHR14149RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIFInterproscan
PTHR13958CENTROSOME-ASSOCIATED PROTEIN 350Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0015935Cellular Componentsmall ribosomal subunitInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0070181Molecular Functionsmall ribosomal subunit rRNA bindingInterproscan
GO:0017183Biological Processprotein histidyl modification to diphthamideInterproscan
GO:0090560Molecular Function2-(3-amino-3-carboxypropyl)histidine synthase activityInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0005802Cellular Componenttrans-Golgi networkInterproscan
GO:0006895Biological ProcessGolgi to endosome transportInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004831Molecular Functiontyrosine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006437Biological Processtyrosyl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0001784Molecular Functionphosphotyrosine residue bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007175Biological Processnegative regulation of epidermal growth factor-activated receptor activityInterproscan
GO:0017124Molecular FunctionSH3 domain bindingInterproscan
GO:0023051Biological Processregulation of signalingInterproscan
GO:0030971Molecular Functionreceptor tyrosine kinase bindingInterproscan
GO:0045121Cellular Componentmembrane raftInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0043087Biological Processregulation of GTPase activityInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005516Molecular Functioncalmodulin bindingInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:1903479Biological Processmitotic actomyosin contractile ring assembly actin filament organizationInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0034453Biological Processmicrotubule anchoringInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02990RP-S6, MRPS6, rpsF; small subunit ribosomal protein S6-Membrane traffickingko04131deepkoala
Mitochondrial biogenesisko03029deepkoala
Ribosomeko03011deepkoala

TOP