Gene detail

Detailed information of g657.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: MCJ7776782.1, serpin family protein [Sedimentisphaerales bacterium]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q52L45	Leukocyte elastase inhibitor OS=Xenopus laevis OX=8355 GN=serpinb1 PE=2 SV=1
Q5I0S8	Leukocyte elastase inhibitor OS=Xenopus tropicalis OX=8364 GN=serpinb1 PE=2 SV=1
P35237	Serpin B6 OS=Homo sapiens OX=9606 GN=SERPINB6 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000018 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000838 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0001201 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0010529 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0012271 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0015176 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0021533 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12596 all species →	Tnp_P_element_C	87kDa Transposase	Family	Interproscan
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00079 all species →	Serpin	Serpin (serine protease inhibitor)	Domain	Interproscan
PF10262 all species →	Rdx	Rdx family	Family	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF14714 all species →	KH_dom-like	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal	Domain	Interproscan
PF01926 all species →	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022242 all species →	Domain	Transposable element P transposase-like, C-terminal	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR036186 all species →	Homologous_superfamily	Serpin superfamily	Interproscan
IPR000215 all species →	Family	Serpin family	Interproscan
IPR042178 all species →	Homologous_superfamily	Serpin superfamily, domain 1	Interproscan
IPR023796 all species →	Domain	Serpin domain	Interproscan
IPR042185 all species →	Homologous_superfamily	Serpin superfamily, domain 2	Interproscan
IPR011893 all species →	Family	Selenoprotein, Rdx-type	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR010230 all species →	Family	FeS cluster assembly SUF system, ATPase SufC	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR016484 all species →	Family	GTPase Der	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR015946 all species →	Homologous_superfamily	K homology domain-like, alpha/beta	Interproscan
IPR032859 all species →	Domain	GTPase Der, C-terminal KH-domain-like	Interproscan
IPR031166 all species →	Domain	EngA-type guanine nucleotide-binding (G) domain	Interproscan
IPR006073 all species →	Domain	GTP binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11461 all species →	SERINE PROTEASE INHIBITOR, SERPIN	Interproscan
PTHR43204 all species →	ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC	Interproscan
PTHR43834 all species →	GTPASE DER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004867 all species →	Molecular Function	serine-type endopeptidase inhibitor activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03977	engA, der; GTPase	-	Ribosome biogenesis	ko03009	deepkoala
K09013	sufC; Fe-S cluster assembly ATP-binding protein	-	Transporters	ko02000	deepkoala
K13963	SERPINB; serpin B	-	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.