Detailed information of g658.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020898868.1, leucine-rich glioma-inactivated protein 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B6IUW3Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=accA PE=3 SV=1
Q2VZG7Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1) OX=342108 GN=accA PE=3 SV=1
Q11DU2Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Chelativorans sp. (strain BNC1) OX=266779 GN=accA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03255ACCAAcetyl co-enzyme A carboxylase carboxyltransferase alpha subunitFamilyInterproscan
PF03736EPTPEPTP domainRepeatInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF08030NAD_binding_6Ferric reductase NAD binding domainDomainInterproscan
PF01794Ferric_reductFerric reductase like transmembrane componentFamilyInterproscan
PF08022FAD_binding_8FAD-binding domainDomainInterproscan
PF01728FtsJFtsJ-like methyltransferaseFamilyInterproscan
PF02541Ppx-GppAPpx/GppA phosphatase familyFamilyInterproscan
PF01189Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan
PF01545Cation_effluxCation efflux familyFamilyInterproscan
PF00278Orn_DAP_Arg_deCPyridoxal-dependent decarboxylase, C-terminal sheet domainDomainInterproscan
PF02784Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001095FamilyAcetyl-CoA carboxylase, alpha subunitInterproscan
IPR011763DomainAcetyl-coenzyme A carboxyltransferase, C-terminalInterproscan
IPR029045Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR009039RepeatEARInterproscan
IPR005492RepeatLeucine-rich glioma-inactivated , EPTP repeatInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR039261Homologous_superfamilyFerredoxin-NADP reductase (FNR), nucleotide-binding domainInterproscan
IPR013121DomainFerric reductase, NAD binding domainInterproscan
IPR013130DomainFerric reductase transmembrane component-like domainInterproscan
IPR050369FamilyRespiratory burst oxidase/Ferric reductaseInterproscan
IPR017927DomainFAD-binding domain, ferredoxin reductase-typeInterproscan
IPR017938Homologous_superfamilyRiboflavin synthase-like beta-barrelInterproscan
IPR013112DomainFAD-binding 8Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR015507FamilyRibosomal RNA large subunit methyltransferase EInterproscan
IPR001678DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan
IPR002877DomainRibosomal RNA methyltransferase, FtsJ domainInterproscan
IPR003695DomainPpx/GppA phosphatase, N-terminalInterproscan
IPR049560DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR050082FamilyRibosomal RNA large subunit methyltransferase RlmEInterproscan
IPR023267FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR002524FamilyCation efflux proteinInterproscan
IPR027469Homologous_superfamilyCation efflux transmembrane domain superfamilyInterproscan
IPR036837Homologous_superfamilyCation efflux protein, cytoplasmic domain superfamilyInterproscan
IPR029066Homologous_superfamilyPLP-binding barrelInterproscan
IPR022657Conserved_siteOrn/DAP/Arg decarboxylase 2, conserved siteInterproscan
IPR002433FamilyOrnithine decarboxylaseInterproscan
IPR022643DomainOrn/DAP/Arg decarboxylase 2, C-terminalInterproscan
IPR022644DomainOrn/DAP/Arg decarboxylase 2, N-terminalInterproscan
IPR000183FamilyOrnithine/DAP/Arg decarboxylaseInterproscan
IPR022653Binding_siteOrn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding siteInterproscan
IPR009006Homologous_superfamilyAlanine racemase/group IV decarboxylase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42853ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT ALPHAInterproscan
PTHR15261THROMBOSPONDIN-TYPE LAMININ G DOMAIN AND EAR REPEAT-CONTAININGInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR11972NADPH OXIDASEInterproscan
PTHR10920RIBOSOMAL RNA METHYLTRANSFERASEInterproscan
PTHR45820FI23527P1Interproscan
PTHR11482ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003989Molecular Functionacetyl-CoA carboxylase activityInterproscan
GO:0006633Biological Processfatty acid biosynthetic processInterproscan
GO:0009317Cellular Componentacetyl-CoA carboxylase complexInterproscan
GO:0016743Molecular Functioncarboxyl- or carbamoyltransferase activityInterproscan
GO:0016874Molecular Functionligase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006952Biological Processdefense responseInterproscan
GO:0016175Molecular Functionsuperoxide-generating NAD(P)H oxidase activityInterproscan
GO:0042554Biological Processsuperoxide anion generationInterproscan
GO:0043020Cellular ComponentNADPH oxidase complexInterproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0008650Molecular FunctionrRNA (uridine-2'-O-)-methyltransferase activityInterproscan
GO:0006812Biological Processmonoatomic cation transportInterproscan
GO:0008324Molecular Functionmonoatomic cation transmembrane transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005385Molecular Functionzinc ion transmembrane transporter activityInterproscan
GO:0006882Biological Processintracellular zinc ion homeostasisInterproscan
GO:0010312Biological Processdetoxification of zinc ionInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071577Biological Processzinc ion transmembrane transportInterproscan
GO:0004586Molecular Functionornithine decarboxylase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006596Biological Processpolyamine biosynthetic processInterproscan
GO:0033387Biological Processputrescine biosynthetic process from ornithineInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01581E4.1.1.17, ODC1, speC, speF; ornithine decarboxylaseEC:4.1.1.17
Fatty acid biosynthesisko00061deepkoala
Membrane traffickingko04131deepkoala
Transportersko02000deepkoala
Efferocytosisko04148deepkoala

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