Gene detail

Detailed information of g6592.t1 in Montipora capitata

Genomic Location: Sc0000142:379784...380269
NR annotation: KAJ7363469.1, positive regulation of rhodopsin protein expression [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9TTF0	Photoreceptor-specific nuclear receptor OS=Bos taurus OX=9913 GN=NR2E3 PE=1 SV=2
Q64104	Nuclear receptor subfamily 2 group E member 1 OS=Mus musculus OX=10090 GN=Nr2e1 PE=1 SV=1
Q91379	Nuclear receptor subfamily 2 group E member 1 OS=Gallus gallus OX=9031 GN=NR2E1 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	Miscellaneous
Transcription Factors Family	RXR-like
Transcription Factors Family	SF-like

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00104	Hormone_recep	Ligand-binding domain of nuclear hormone receptor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001723	Family	Nuclear hormone receptor	Interproscan
IPR050274	Family	Nuclear hormone receptor family NR2 subfamily	Interproscan
IPR035500	Homologous_superfamily	Nuclear hormone receptor-like domain superfamily	Interproscan
IPR000536	Domain	Nuclear hormone receptor, ligand-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24083	NUCLEAR HORMONE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0004879	Molecular Function	nuclear receptor activity	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0048856	Biological Process	anatomical structure development	Interproscan