Gene detail

Detailed information of g660.t1 in Tripedalia maipoensis

Genomic Location: scaffold_1:34646148...34656186
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10046 all species →	BLOC1_2	Biogenesis of lysosome-related organelles complex-1 subunit 2	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019269 all species →	Family	Biogenesis of lysosome-related organelles complex-1, subunit 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46479 all species →	BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000930 all species →	Cellular Component	gamma-tubulin complex	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0031083 all species →	Cellular Component	BLOC-1 complex	Interproscan
GO:0032418 all species →	Biological Process	lysosome localization	Interproscan
GO:0043015 all species →	Molecular Function	gamma-tubulin binding	Interproscan
GO:0099078 all species →	Cellular Component	BORC complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16750	BLOC1S2; biogenesis of lysosome-related organelles complex 1 subunit 2	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.