Detailed information of g6618.t1 in Acropora digitifera

Genomic Location: chr3Alt:20943537...20958896
NR annotation: XP_015779266.1, PREDICTED: uncharacterized protein LOC107357136 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Ubiquitin familyDUB|ULP|ULP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00567
all species →		TUDORTudor domainDomainInterproscan
PF02902
all species →		Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003653
all species →		DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR002999
all species →		DomainTudor domainInterproscan
IPR050621
all species →		FamilyTudor domain-containingInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR035437
all species →		Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22948
all species →		TUDOR DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g6618.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP