Detailed information of g6628.t1 in Acropora digitifera

Genomic Location: chr3Alt:21089617...21101006
NR annotation: XP_015775727.1, PREDICTED: telomeric repeat-binding factor 2-like isoform X1 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O35144Telomeric repeat-binding factor 2 OS=Mus musculus OX=10090 GN=Terf2 PE=1 SV=3
O55036Telomeric repeat-binding factor 1 (Fragment) OS=Cricetulus griseus OX=10029 GN=TERF1 PE=2 SV=1
P54274Telomeric repeat-binding factor 1 OS=Homo sapiens OX=9606 GN=TERF1 PE=1 SV=3
 Gene family
Family typeMembership / link
Transcription factor familyMYB · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249
all species →		Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036507
all species →		Homologous_superfamilyTelomere repeat-binding factor, dimerisation domain superfamilyInterproscan
IPR030657
all species →		FamilyTelomeric repeat-binding factor 2Interproscan
IPR017930
all species →		DomainMyb domainInterproscan
IPR001005
all species →		DomainSANT/Myb domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46833
all species →		TELOMERIC REPEAT-BINDING FACTOR 2 TERF2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000723
all species →		Biological Processtelomere maintenanceInterproscan
GO:0000781
all species →		Cellular Componentchromosome, telomeric regionInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0031848
all species →		Biological Processprotection from non-homologous end joining at telomereInterproscan
GO:0042162
all species →		Molecular Functiontelomeric DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g6628.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP