Detailed information of g666.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: RSH89224.1, Phosphatidyl-N-methylethanolamine N-methyltransferase [Saitozyma podzolica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7S5W9Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=chol-2 PE=1 SV=1
Q7YRH6Phosphatidylethanolamine N-methyltransferase OS=Bos taurus OX=9913 GN=PEMT PE=2 SV=1
O74827Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cho1 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF04191PEMTPhospholipid methyltransferase FamilyInterproscan
PF03448MgtE_NMgtE intracellular N domainDomainInterproscan
PF02666PS_DcarbxylasePhosphatidylserine decarboxylaseFamilyInterproscan
PF00571CBSCBS domainDomainInterproscan
PF00919UPF0004Uncharacterized protein family UPF0004FamilyInterproscan
PF04055Radical_SAMRadical SAM superfamilyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF16953PRORPProtein-only RNase PDomainInterproscan
PF01040UbiAUbiA prenyltransferase familyFamilyInterproscan
PF16900REPA_OB_2Replication protein A OB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR050080FamilyRibonuclease PHInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR024960FamilyPhosphatidyl-N-methylethanolamine/Phosphatidylethanolamine N-methyltransferaseInterproscan
IPR007318FamilyPhospholipid methyltransferaseInterproscan
IPR000644DomainCBS domainInterproscan
IPR006668DomainMagnesium transporter, MgtE intracellular domainInterproscan
IPR007197DomainRadical SAMInterproscan
IPR003817FamilyPhosphatidylserine decarboxylase-relatedInterproscan
IPR020612Conserved_siteMethylthiotransferase, conserved siteInterproscan
IPR046342Homologous_superfamilyCBS domain superfamilyInterproscan
IPR013848DomainMethylthiotransferase, N-terminalInterproscan
IPR006638DomainElp3/MiaA/NifB-like, radical SAM core domainInterproscan
IPR005839FamilyMethylthiotransferaseInterproscan
IPR023404Homologous_superfamilyRadical SAM, alpha/beta horseshoeInterproscan
IPR006467FamilyMiaB-like tRNA modifying enzyme, bacteriaInterproscan
IPR038135Homologous_superfamilyMethylthiotransferase, N-terminal domain superfamilyInterproscan
IPR038076Homologous_superfamilyMgtE, N-terminal domain superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR031595DomainProtein-only RNase P, C-terminalInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR002885RepeatPentatricopeptide repeatInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR006369FamilyProtohaem IX farnesyltransferaseInterproscan
IPR044878Homologous_superfamilyUbiA prenyltransferase superfamilyInterproscan
IPR000537FamilyUbiA prenyltransferase familyInterproscan
IPR030470Conserved_siteUbiA prenyltransferase conserved siteInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR031657DomainReplication protein A, OB domainInterproscan
IPR052469FamilyMeiosis-specific OB domain-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11953EXOSOME COMPLEX COMPONENTInterproscan
PTHR15458PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASEInterproscan
PTHR11918RADICAL SAM PROTEINSInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR13547UNCHARACTERIZEDInterproscan
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan
PTHR43448PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIALInterproscan
PTHR21166UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000176Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0034475Biological ProcessU4 snRNA 3'-end processingInterproscan
GO:0071028Biological Processnuclear mRNA surveillanceInterproscan
GO:0071051Biological Processpoly(A)-dependent snoRNA 3'-end processingInterproscan
GO:0006656Biological Processphosphatidylcholine biosynthetic processInterproscan
GO:0008757Molecular FunctionS-adenosylmethionine-dependent methyltransferase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0004609Molecular Functionphosphatidylserine decarboxylase activityInterproscan
GO:0008654Biological Processphospholipid biosynthetic processInterproscan
GO:0051539Molecular Function4 iron, 4 sulfur cluster bindingInterproscan
GO:0035596Molecular Functionmethylthiotransferase activityInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0035598Molecular FunctionN6-threonylcarbomyladenosine methylthiotransferase activityInterproscan
GO:0035600Biological ProcesstRNA methylthiolationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001682Biological ProcesstRNA 5'-leader removalInterproscan
GO:0004526Molecular Functionribonuclease P activityInterproscan
GO:0030678Cellular Componentmitochondrial ribonuclease P complexInterproscan
GO:0097745Biological Processmitochondrial tRNA 5'-end processingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan
GO:0008495Molecular Functionprotoheme IX farnesyltransferase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006784Biological Processheme A biosynthetic processInterproscan
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0008310Molecular Functionsingle-stranded DNA 3'-5' DNA exonuclease activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02257COX10, ctaB, cyoE; heme o synthaseEC:2.5.1.141
Transfer RNA biogenesisko03016deepkoala
Mitochondrial biogenesisko03029deepkoala
Mitochondrial biogenesisko03029deepkoala

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