Detailed information of g668.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: OGB92571.1, hypothetical protein A3H39_07300 [candidate division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q2SQ70Porphobilinogen deaminase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=hemC PE=3 SV=1
A7MXU9Porphobilinogen deaminase OS=Vibrio campbellii (strain ATCC BAA-1116) OX=2902295 GN=hemC PE=3 SV=1
Q8DD85Porphobilinogen deaminase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=hemC PE=3 SV=1
Gene familySubfamily
Transcription Factors Familyzf-CCCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00631G-gammaGGL domainDomainInterproscan
PF01488Shikimate_DHShikimate / quinate 5-dehydrogenaseFamilyInterproscan
PF03900Porphobil_deamCPorphobilinogen deaminase, C-terminal domainDomainInterproscan
PF00745GlutR_dimerGlutamyl-tRNAGlu reductase, dimerisation domainDomainInterproscan
PF01379Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainDomainInterproscan
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF00112Peptidase_C1Papain family cysteine proteaseDomainInterproscan
PF03446NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenaseDomainInterproscan
PF14833NAD_binding_11NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenaseDomainInterproscan
PF00085ThioredoxinThioredoxinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015898DomainG-protein gamma-like domainInterproscan
IPR001770FamilyG-protein, gamma subunitInterproscan
IPR036284Homologous_superfamilyG-protein gamma-like domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR006151DomainQuinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductaseInterproscan
IPR000860FamilyPorphobilinogen deaminaseInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR022419Binding_sitePorphobilinogen deaminase, dipyrromethane cofactor binding siteInterproscan
IPR036803Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan
IPR022418DomainPorphobilinogen deaminase, C-terminalInterproscan
IPR015896DomainTetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domainInterproscan
IPR022417DomainPorphobilinogen deaminase, N-terminalInterproscan
IPR036453Homologous_superfamilyGlutamyl tRNA-reductase dimerization domain superfamilyInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR000668DomainPeptidase C1A, papain C-terminalInterproscan
IPR025661Active_siteCysteine peptidase, asparagine active siteInterproscan
IPR039417DomainPapain-like cysteine endopeptidaseInterproscan
IPR013128FamilyPeptidase C1AInterproscan
IPR025660Active_siteCysteine peptidase, histidine active siteInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR006115Domain6-phosphogluconate dehydrogenase, NADP-bindingInterproscan
IPR013328Homologous_superfamily6-phosphogluconate dehydrogenase, domain 2Interproscan
IPR029154Domain3-hydroxyisobutyrate dehydrogenase-like, NAD-binding domainInterproscan
IPR008927Homologous_superfamily6-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyInterproscan
IPR015815Family3-hydroxyisobutyrate dehydrogenase-relatedInterproscan
IPR052792FamilyThioredoxin domain-containing protein 11Interproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR013766DomainThioredoxin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13809GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNITInterproscan
PTHR11557PORPHOBILINOGEN DEAMINASEInterproscan
PTHR46156CCCH ZINGC FINGERInterproscan
PTHR12411CYSTEINE PROTEASE FAMILY C1-RELATEDInterproscan
PTHR18937STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERInterproscan
PTHR430603-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATEDInterproscan
PTHR46497THIOREDOXIN DOMAIN-CONTAINING PROTEIN 11Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005834Cellular Componentheterotrimeric G-protein complexInterproscan
GO:0031681Molecular FunctionG-protein beta-subunit bindingInterproscan
GO:0004418Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan
GO:0018160Biological Processpeptidyl-pyrromethane cofactor linkageInterproscan
GO:0008883Molecular Functionglutamyl-tRNA reductase activityInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0004197Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0008656Molecular Functioncysteine-type endopeptidase activator activity involved in apoptotic processInterproscan
GO:0010952Biological Processpositive regulation of peptidase activityInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:2001235Biological Processpositive regulation of apoptotic signaling pathwayInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan

TOP