Gene detail

Detailed information of g669.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: CAH3146747.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q61214	Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Mus musculus OX=10090 GN=Dyrk1a PE=1 SV=1
Q63470	Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Rattus norvegicus OX=10116 GN=Dyrk1a PE=1 SV=2
Q13627	Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Homo sapiens OX=9606 GN=DYRK1A PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000149 (this species only)
Orthogroup (gene family)	OG0000461 (this species only)
Orthogroup (gene family)	OG0001107 (this species only)
Orthogroup (gene family)	OG0001140 (this species only)
Orthogroup (gene family)	OG0001315 (this species only)
Orthogroup (gene family)	OG0001530 (this species only)
Orthogroup (gene family)	OG0002153 (this species only)
Orthogroup (gene family)	OG0005223 (this species only)
Orthogroup (gene family)	OG0005999 (this species only)
Orthogroup (gene family)	OG0006350 (this species only)
Orthogroup (gene family)	OG0009984 (this species only)
Orthogroup (gene family)	OG0012408 (this species only)
Orthogroup (gene family)	OG0171006 (this species only)
Orthogroup (gene family)	OG0173723 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02145 all species →	Rap_GAP	Rap/ran-GAP	Family	Interproscan
PF02187 all species →	GAS2	Growth-Arrest-Specific Protein 2 Domain	Family	Interproscan
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan
PF01300 all species →	Sua5_yciO_yrdC	Telomere recombination	Family	Interproscan
PF04000 all species →	Sas10_Utp3	Sas10/Utp3/C1D family	Family	Interproscan
PF00335 all species →	Tetraspanin	Tetraspanin family	Family	Interproscan
PF00120 all species →	Gln-synt_C	Glutamine synthetase, catalytic domain	Domain	Interproscan
PF00375 all species →	SDF	Sodium:dicarboxylate symporter family	Family	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF02729 all species →	OTCace_N	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain	Domain	Interproscan
PF00185 all species →	OTCace	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14622 all species →	Ribonucleas_3_3	Ribonuclease-III-like	Family	Interproscan
PF02170 all species →	PAZ	PAZ domain	Domain	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF03368 all species →	Dicer_dimer	Dicer dimerisation domain	Domain	Interproscan
PF00636 all species →	Ribonuclease_3	Ribonuclease III domain	Family	Interproscan
PF20931 all species →	Dicer_platform	Dicer, platform domain	Domain	Interproscan
PF20932 all species →	Dicer_dsRBD	Dicer, dsRNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035974 all species →	Homologous_superfamily	Rap/Ran-GAP superfamily	Interproscan
IPR000331 all species →	Domain	Rap/Ran-GAP domain	Interproscan
IPR050989 all species →	Family	Rap1/Ran GTPase-activating	Interproscan
IPR036534 all species →	Homologous_superfamily	GAR domain superfamily	Interproscan
IPR003108 all species →	Domain	GAR domain	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR017945 all species →	Homologous_superfamily	DHBP synthase RibB-like alpha/beta domain superfamily	Interproscan
IPR006070 all species →	Domain	Threonylcarbamoyl-AMP synthase-like domain	Interproscan
IPR050156 all species →	Family	Threonylcarbamoyl-AMP synthase, SUA5	Interproscan
IPR007146 all species →	Family	Sas10/Utp3/C1D	Interproscan
IPR008952 all species →	Homologous_superfamily	Tetraspanin, EC2 domain superfamily	Interproscan
IPR018503 all species →	Conserved_site	Tetraspanin, conserved site	Interproscan
IPR018499 all species →	Family	Tetraspanin/Peripherin	Interproscan
IPR000301 all species →	Family	Tetraspanin, animals	Interproscan
IPR008146 all species →	Domain	Glutamine synthetase, catalytic domain	Interproscan
IPR014746 all species →	Homologous_superfamily	Glutamine synthetase/guanido kinase, catalytic domain	Interproscan
IPR027303 all species →	Conserved_site	Glutamine synthetase, glycine-rich site	Interproscan
IPR004809 all species →	Family	Glutamine synthetase type I	Interproscan
IPR001637 all species →	Conserved_site	Glutamine synthetase class-I, adenylation site	Interproscan
IPR036458 all species →	Homologous_superfamily	Sodium:dicarboxylate symporter superfamily	Interproscan
IPR018107 all species →	Conserved_site	Sodium:dicarboxylate symporter, conserved site	Interproscan
IPR001991 all species →	Family	Sodium:dicarboxylate symporter	Interproscan
IPR050746 all species →	Family	Dicarboxylate/Amino Acid:Cation Symporter	Interproscan
IPR050494 all species →	Family	Serine/threonine and dual-specificity kinase	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR044131 all species →	Domain	Dual specificity tyrosine-phosphorylation-regulated kinase 1A/1B, catalytic domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR002082 all species →	Family	Aspartate carbamoyltransferase	Interproscan
IPR006132 all species →	Domain	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding	Interproscan
IPR036901 all species →	Homologous_superfamily	Aspartate/ornithine carbamoyltransferase superfamily	Interproscan
IPR006130 all species →	Family	Aspartate/ornithine carbamoyltransferase	Interproscan
IPR006131 all species →	Domain	Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000999 all species →	Domain	Ribonuclease III domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR038248 all species →	Homologous_superfamily	Dicer dimerisation domain superfamily	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR003100 all species →	Domain	PAZ domain	Interproscan
IPR036085 all species →	Homologous_superfamily	PAZ domain superfamily	Interproscan
IPR005034 all species →	Domain	Dicer dimerisation domain	Interproscan
IPR036389 all species →	Homologous_superfamily	Ribonuclease III, endonuclease domain superfamily	Interproscan
IPR048512 all species →	Domain	Dicer, platform domain	Interproscan
IPR044441 all species →	Domain	Dicer, double-stranded RNA-binding domain	Interproscan
IPR040401 all species →	Family	Coiled-coil domain-containing protein 162	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15711 all species →	RAP GTPASE-ACTIVATING PROTEIN	Interproscan
PTHR46756 all species →	TRANSGELIN	Interproscan
PTHR17490 all species →	SUA5	Interproscan
PTHR13237 all species →	SOMETHING ABOUT SILENCING PROTEIN 10-RELATED	Interproscan
PTHR19282 all species →	TETRASPANIN	Interproscan
PTHR43407 all species →	GLUTAMINE SYNTHETASE	Interproscan
PTHR11958 all species →	SODIUM/DICARBOXYLATE SYMPORTER-RELATED	Interproscan
PTHR24058 all species →	DUAL SPECIFICITY PROTEIN KINASE	Interproscan
PTHR45753 all species →	ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL	Interproscan
PTHR19446 all species →	REVERSE TRANSCRIPTASES	Interproscan
PTHR14950 all species →	DICER-RELATED	Interproscan
PTHR33331 all species →	COILED-COIL DOMAIN-CONTAINING PROTEIN 162	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0051056 all species →	Biological Process	regulation of small GTPase mediated signal transduction	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0090630 all species →	Biological Process	activation of GTPase activity	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0008093 all species →	Molecular Function	cytoskeletal anchor activity	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0051764 all species →	Biological Process	actin crosslink formation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003725 all species →	Molecular Function	double-stranded RNA binding	Interproscan
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0006450 all species →	Biological Process	regulation of translational fidelity	Interproscan
GO:0016779 all species →	Molecular Function	nucleotidyltransferase activity	Interproscan
GO:0000462 all species →	Biological Process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0032040 all species →	Cellular Component	small-subunit processome	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0004356 all species →	Molecular Function	glutamine synthetase activity	Interproscan
GO:0006807 all species →	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0006542 all species →	Biological Process	glutamine biosynthetic process	Interproscan
GO:0019740 all species →	Biological Process	nitrogen utilization	Interproscan
GO:0015293 all species →	Molecular Function	symporter activity	Interproscan
GO:0005313 all species →	Molecular Function	L-glutamate transmembrane transporter activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0015175 all species →	Molecular Function	neutral L-amino acid transmembrane transporter activity	Interproscan
GO:0015501 all species →	Molecular Function	glutamate:sodium symporter activity	Interproscan
GO:0015813 all species →	Biological Process	L-glutamate transmembrane transport	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0018107 all species →	Biological Process	peptidyl-threonine phosphorylation	Interproscan
GO:0045893 all species →	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004712 all species →	Molecular Function	protein serine/threonine/tyrosine kinase activity	Interproscan
GO:0046777 all species →	Biological Process	protein autophosphorylation	Interproscan
GO:0004070 all species →	Molecular Function	aspartate carbamoyltransferase activity	Interproscan
GO:0006207 all species →	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0006520 all species →	Biological Process	amino acid metabolic process	Interproscan
GO:0016743 all species →	Molecular Function	carboxyl- or carbamoyltransferase activity	Interproscan
GO:0016597 all species →	Molecular Function	amino acid binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0004525 all species →	Molecular Function	ribonuclease III activity	Interproscan
GO:0016442 all species →	Cellular Component	RISC complex	Interproscan
GO:0030422 all species →	Biological Process	siRNA processing	Interproscan
GO:0090501 all species →	Biological Process	obsolete RNA phosphodiester bond hydrolysis	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0016891 all species →	Molecular Function	RNA endonuclease activity, producing 5'-phosphomonoesters	Interproscan
GO:0031054 all species →	Biological Process	pre-miRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00609	pyrB, PYR2; aspartate carbamoyltransferase catalytic subunit	EC:2.1.3.2	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala
K06346	jag; spoIIIJ-associated protein	-	Cell growth	-	deepkoala
K06497	CD63, MLA1, TSPAN30; CD63 antigen	-	CD molecules	ko04090	deepkoala
K08825	DYRK1; dual specificity tyrosine-phosphorylation-regulated kinase 1	EC:2.7.12.1	Membrane trafficking	ko04131	deepkoala
K11592	DICER1, DCR1; endoribonuclease Dicer	EC:3.1.26.-	Chromosome and associated proteins	ko03036	deepkoala
K14765	NGDN, LCP5; U3 small nucleolar ribonucleoprotein protein LCP5	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.