Detailed information of g670.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: AAC63362.1, head-activator binding protein precursor [Hydra viridissima]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q98930Sortilin-related receptor (Fragment) OS=Gallus gallus OX=9031 GN=SORL1 PE=2 SV=1
Q95209Sortilin-related receptor OS=Oryctolagus cuniculus OX=9986 GN=SORL1 PE=1 SV=1
O88307Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13517FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF21478GcvP2_CGlycine dehydrogenase, C-terminal domainDomainInterproscan
PF10574UPF0552Arp2/3-interacting proteins ArpinFamilyInterproscan
PF05679CHGNChondroitin N-acetylgalactosaminyltransferaseFamilyInterproscan
PF00188CAPCysteine-rich secretory protein familyDomainInterproscan
PF15901Sortilin_CSortilin, neurotensin receptor 3, C-terminalDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF15902Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF08238Sel1Sel1 repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR049316DomainGlycine dehydrogenase, C-terminal domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR020581FamilyGlycine cleavage system P proteinInterproscan
IPR052206FamilyAll-trans-retinol saturaseInterproscan
IPR018889FamilyArpinInterproscan
IPR008428FamilyChondroitin N-acetylgalactosaminyltransferaseInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR051227FamilyChondroitin sulfate glycosyltransferaseInterproscan
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR014044DomainCAP domainInterproscan
IPR001283FamilyCysteine-rich secretory protein-relatedInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR031777DomainSortilin, C-terminalInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR006581DomainVPS10Interproscan
IPR031778DomainSortilin, N-terminalInterproscan
IPR050310FamilyVPS10-related sortilin family receptorsInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR050055FamilyElongation factor Tu GTPaseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR006597RepeatSel1-like repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46580SENSOR KINASE-RELATEDInterproscan
PTHR33327ENDONUCLEASEInterproscan
PTHR11773GLYCINE DEHYDROGENASE, DECARBOXYLATINGInterproscan
PTHR46091BLR7054 PROTEINInterproscan
PTHR31199ARPINInterproscan
PTHR12369CHONDROITIN SYNTHASEInterproscan
PTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDInterproscan
PTHR12106SORTILIN RELATEDInterproscan
PTHR43721ELONGATION FACTOR TU-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004375Molecular Functionglycine dehydrogenase (decarboxylating) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005960Cellular Componentglycine cleavage complexInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan
GO:0016594Molecular Functionglycine bindingInterproscan
GO:0019464Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0051126Biological Processnegative regulation of actin nucleationInterproscan
GO:0008376Molecular Functionacetylgalactosaminyltransferase activityInterproscan
GO:0032580Cellular ComponentGolgi cisterna membraneInterproscan
GO:0030206Biological Processchondroitin sulfate biosynthetic processInterproscan
GO:0047238Molecular Functionglucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006892Biological Processpost-Golgi vesicle-mediated transportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0006414Biological Processtranslational elongationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00746CSGALNACT1_2; chondroitin sulfate N-acetylgalactosaminyltransferase 1/2EC:2.4.1.174
EC:2.4.1.175
Membrane traffickingko04131deepkoala
Glycosyltransferasesko01003deepkoala

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