Detailed information of g6788.t2.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: CAH3031093.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8JHW2Thrombospondin-3a OS=Danio rerio OX=7955 GN=thbs3a PE=2 SV=2
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
P49746Thrombospondin-3 OS=Homo sapiens OX=9606 GN=THBS3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR024731DomainEGF domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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