Detailed information of g680.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_031566321.1, aminomethyltransferase, mitochondrial-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P25285Aminomethyltransferase, mitochondrial OS=Bos taurus OX=9913 GN=AMT PE=1 SV=1
P48728Aminomethyltransferase, mitochondrial OS=Homo sapiens OX=9606 GN=AMT PE=1 SV=1
Q8CFA2Aminomethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Amt PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17286PRMT5_CPRMT5 oligomerisation domainDomainInterproscan
PF05185PRMT5PRMT5 arginine-N-methyltransferaseDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF01571GCV_TAminomethyltransferase folate-binding domainDomainInterproscan
PF08669GCV_T_CGlycine cleavage T-protein C-terminal barrel domainDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00773RNBRNB domainDomainInterproscan
PF17215Rrp44_S1S1 domainDomainInterproscan
PF17216Rrp44_CSD1Rrp44-like cold shock domainDomainInterproscan
PF17849OB_Dis3Dis3-like cold-shock domain 2 (CSD2)DomainInterproscan
PF13638PIN_4PIN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025799FamilyProtein arginine N-methyltransferaseInterproscan
IPR035248DomainPRMT5, oligomerisation domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR035075DomainPRMT5 arginine-N-methyltransferaseInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR006222DomainAminomethyltransferase, folate-binding domainInterproscan
IPR027266Homologous_superfamilyGTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1Interproscan
IPR013977DomainGlycine cleavage T-protein, C-terminal barrel domainInterproscan
IPR028896FamilyAminomethyltransferase-likeInterproscan
IPR006223FamilyGlycine cleavage system T proteinInterproscan
IPR029043Homologous_superfamilyGlycine cleavage T-protein/YgfZ, C-terminalInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR040410FamilyUPF0658 Golgi apparatus membrane proteinInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR001900DomainRibonuclease II/RInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR002716DomainPIN domainInterproscan
IPR050180FamilyRNR RibonucleaseInterproscan
IPR033770DomainExosome complex exonuclease RRP44, S1 domainInterproscan
IPR033771DomainRrp44-like cold shock domainInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR041505DomainDis3-like cold-shock domain 2Interproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10738PROTEIN ARGININE N-METHYLTRANSFERASE 5Interproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR43757AMINOMETHYLTRANSFERASEInterproscan
PTHR34391UPF0658 GOLGI APPARATUS MEMBRANE PROTEIN C1952.10C-RELATEDInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan
PTHR23355RIBONUCLEASEInterproscan
PTHR45695LEUCOKININ RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008469Molecular Functionhistone arginine N-methyltransferase activityInterproscan
GO:0016274Molecular Functionprotein-arginine N-methyltransferase activityInterproscan
GO:0018216Biological Processpeptidyl-arginine methylationInterproscan
GO:0034969Biological Processobsolete histone arginine methylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0004047Molecular Functionaminomethyltransferase activityInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000176Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12585DIS3, RRP44; exosome complex exonuclease DIS3/RRP44EC:3.1.13.-
One carbon pool by folateko00670deepkoala
Messenger RNA biogenesisko03019deepkoala

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