Detailed information of g6814.t1 in Acropora digitifera

Genomic Location: chr3Alt:23447876...23450972
NR annotation: XP_029200056.2, E3 ubiquitin-protein ligase MYLIP-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q05AK5E3 ubiquitin-protein ligase MYLIP-B OS=Danio rerio OX=7955 GN=mylipb PE=2 SV=1
Q16825Tyrosine-protein phosphatase non-receptor type 21 OS=Homo sapiens OX=9606 GN=PTPN21 PE=1 SV=2
Q62728Tyrosine-protein phosphatase non-receptor type 21 OS=Rattus norvegicus OX=10116 GN=Ptpn21 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09380
all species →		FERM_CFERM C-terminal PH-like domainDomainInterproscan
PF09379
all species →		FERM_NFERM N-terminal domain DomainInterproscan
PF00373
all species →		FERM_MFERM central domainDomainInterproscan
PF13920
all species →		zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000299
all species →		DomainFERM domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR018980
all species →		DomainFERM, C-terminal PH-like domainInterproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR035963
all species →		Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR014352
all species →		Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019749
all species →		DomainBand 4.1 domainInterproscan
IPR018979
all species →		DomainFERM, N-terminalInterproscan
IPR019748
all species →		DomainFERM central domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23280
all species →		4.1 G PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005856
all species →		Cellular ComponentcytoskeletonInterproscan
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10637MYLIP, MIR; E3 ubiquitin-protein ligase MYLIPEC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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