Gene detail

Detailed information of g683.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: KXJ26195.1, Monocarboxylate transporter 10 [Exaiptasia diaphana]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZJU0	Monocarboxylate transporter 9 OS=Gallus gallus OX=9031 GN=SLC16A9 PE=2 SV=1
B3EWY9	Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
B3EWZ3	Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000019 (this species only)
Orthogroup (gene family)	OG0000026 (this species only)
Orthogroup (gene family)	OG0000056 (this species only)
Orthogroup (gene family)	OG0000465 (this species only)
Orthogroup (gene family)	OG0000555 (this species only)
Orthogroup (gene family)	OG0001484 (this species only)
Orthogroup (gene family)	OG0003187 (this species only)
Orthogroup (gene family)	OG0003454 (this species only)
Orthogroup (gene family)	OG0006751 (this species only)
Orthogroup (gene family)	OG0007802 (this species only)
Orthogroup (gene family)	OG0059522 (this species only)
Orthogroup (gene family)	OG0059573 (this species only)
Orthogroup (gene family)	OG0173553 (this species only)
Orthogroup (gene family)	OG0174254 (this species only)
Orthogroup (gene family)	OG0174542 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00090 all species →	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF08685 all species →	GON	GON domain	Domain	Interproscan
PF07691 all species →	PA14	PA14 domain	Domain	Interproscan
PF02840 all species →	Prp18	Prp18 domain	Family	Interproscan
PF08799 all species →	PRP4	pre-mRNA processing factor 4 (PRP4) like	Domain	Interproscan
PF15024 all species →	Glyco_transf_18	Glycosyltransferase family 18	Family	Interproscan
PF13640 all species →	2OG-FeII_Oxy_3	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan
PF08336 all species →	P4Ha_N	Prolyl 4-Hydroxylase alpha-subunit, N-terminal region	Family	Interproscan
PF02140 all species →	Gal_Lectin	Galactose binding lectin domain	Domain	Interproscan
PF02318 all species →	FYVE_2	FYVE-type zinc finger	Family	Interproscan
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF13656 all species →	RNA_pol_L_2	RNA polymerase Rpb3/Rpb11 dimerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR000884 all species →	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR037524 all species →	Domain	PA14/GLEYA domain	Interproscan
IPR036383 all species →	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR012314 all species →	Domain	Peptidase M12B, GON-ADAMTSs	Interproscan
IPR011658 all species →	Domain	PA14 domain	Interproscan
IPR050525 all species →	Family	Extracellular Matrix Assembly and Organization	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR004098 all species →	Domain	Prp18	Interproscan
IPR039979 all species →	Family	Pre-mRNA-splicing factor 18	Interproscan
IPR014906 all species →	Domain	Pre-mRNA processing factor 4 (PRP4)-like	Interproscan
IPR036285 all species →	Homologous_superfamily	PRP4-like superfamily	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR026116 all species →	Family	Glycosyltransferase family 18	Interproscan
IPR052105 all species →	Family	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase	Interproscan
IPR045054 all species →	Family	Prolyl 4-hydroxylase	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR006620 all species →	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan
IPR044862 all species →	Domain	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain	Interproscan
IPR013547 all species →	Domain	Prolyl 4-hydroxylase alpha-subunit, N-terminal	Interproscan
IPR005123 all species →	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan
IPR000922 all species →	Domain	D-galactoside/L-rhamnose binding SUEL lectin domain	Interproscan
IPR043159 all species →	Homologous_superfamily	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Interproscan
IPR036517 all species →	Homologous_superfamily	FF domain superfamily	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR010911 all species →	Domain	Rab-binding domain	Interproscan
IPR039032 all species →	Family	Rim-like	Interproscan
IPR041282 all species →	Domain	FYVE-type zinc finger	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan
IPR020846 all species →	Domain	Major facilitator superfamily domain	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR050327 all species →	Family	Proton-linked Monocarboxylate Transporter	Interproscan
IPR009025 all species →	Domain	DNA-directed RNA polymerase, RBP11-like dimerisation domain	Interproscan
IPR008193 all species →	Conserved_site	DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site	Interproscan
IPR037685 all species →	Family	RNA polymerase RBP11	Interproscan
IPR036603 all species →	Homologous_superfamily	RNA polymerase, RBP11-like subunit	Interproscan
IPR022905 all species →	Family	DNA-directed RNA polymerase subunit Rpo11-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24020 all species →	COLLAGEN ALPHA	Interproscan
PTHR13007 all species →	PRE-MRNA SPLICING FACTOR-RELATED	Interproscan
PTHR15075 all species →	ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE	Interproscan
PTHR10869 all species →	PROLYL 4-HYDROXYLASE ALPHA SUBUNIT	Interproscan
PTHR46780 all species →	PROTEIN EVA-1	Interproscan
PTHR12157 all species →	REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN	Interproscan
PTHR11360 all species →	MONOCARBOXYLATE TRANSPORTER	Interproscan
PTHR13946 all species →	DNA-DIRECTED RNA POLYMERASE I,II,III	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005681 all species →	Cellular Component	spliceosomal complex	Interproscan
GO:0008380 all species →	Biological Process	RNA splicing	Interproscan
GO:0000350 all species →	Biological Process	generation of catalytic spliceosome for second transesterification step	Interproscan
GO:0005682 all species →	Cellular Component	U5 snRNP	Interproscan
GO:0046540 all species →	Cellular Component	U4/U6 x U5 tri-snRNP complex	Interproscan
GO:0071021 all species →	Cellular Component	U2-type post-spliceosomal complex	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0030144 all species →	Molecular Function	alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0004656 all species →	Molecular Function	procollagen-proline 4-dioxygenase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0018401 all species →	Biological Process	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0031418 all species →	Molecular Function	L-ascorbic acid binding	Interproscan
GO:0030246 all species →	Molecular Function	carbohydrate binding	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0006887 all species →	Biological Process	exocytosis	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0042391 all species →	Biological Process	regulation of membrane potential	Interproscan
GO:0042734 all species →	Cellular Component	presynaptic membrane	Interproscan
GO:0044325 all species →	Molecular Function	transmembrane transporter binding	Interproscan
GO:0048167 all species →	Biological Process	regulation of synaptic plasticity	Interproscan
GO:0048788 all species →	Cellular Component	cytoskeleton of presynaptic active zone	Interproscan
GO:0048791 all species →	Biological Process	calcium ion-regulated exocytosis of neurotransmitter	Interproscan
GO:0050806 all species →	Biological Process	positive regulation of synaptic transmission	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0008028 all species →	Molecular Function	monocarboxylic acid transmembrane transporter activity	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003899 all species →	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0001055 all species →	Molecular Function	RNA polymerase II activity	Interproscan
GO:0005665 all species →	Cellular Component	RNA polymerase II, core complex	Interproscan
GO:0006366 all species →	Biological Process	transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00472	P4HA; prolyl 4-hydroxylase	EC:1.14.11.2	Arginine and proline metabolism	ko00330	deepkoala
K03008	RPB11, POLR2J; DNA-directed RNA polymerase II subunit RPB11	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.