Detailed information of g687.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_015760990.1, PREDICTED: YY1-associated factor 2-like isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q99LW6YY1-associated factor 2 OS=Mus musculus OX=10090 GN=Yaf2 PE=1 SV=1
Q8IY57YY1-associated factor 2 OS=Homo sapiens OX=9606 GN=YAF2 PE=1 SV=3
Q8N488RING1 and YY1-binding protein OS=Homo sapiens OX=9606 GN=RYBP PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyMYB
Ubiquitin FamilyUBD|ZnF|NZF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF01105EMP24_GP25Lemp24/gp25L/p24 family/GOLDDomainInterproscan
PF04145CtrCtr copper transporter familyFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF16188Peptidase_M24_CC-terminal region of peptidase_M24DomainInterproscan
PF00557Peptidase_M24Metallopeptidase family M24DomainInterproscan
PF17219YAF2_RYBPYaf2/RYBP C-terminal binding motifMotifInterproscan
PF00641zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan
PF04003Utp12Dip2/Utp12 FamilyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001005DomainSANT/Myb domainInterproscan
IPR017930DomainMyb domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR051575FamilyMyb-like DNA-bindingInterproscan
IPR009038DomainGOLD domainInterproscan
IPR015720FamilyTransmembrane emp24 domain-containing proteinInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007274FamilyCtr copper transporterInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR050422FamilyXaa-Pro aminopeptidase PInterproscan
IPR032416DomainPeptidase M24, C-terminal domainInterproscan
IPR000994DomainPeptidase M24Interproscan
IPR036005Homologous_superfamilyCreatinase/aminopeptidase-likeInterproscan
IPR033774Conserved_siteYaf2/RYBP C-terminal binding motifInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR039958FamilyRING1 and YY1-binding protein/YY1-associated factor 2Interproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR007148DomainSmall-subunit processome, Utp12Interproscan
IPR027145FamilyPeriodic tryptophan protein 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46621SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4Interproscan
PTHR45615MYOSIN HEAVY CHAIN, NON-MUSCLEInterproscan
PTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINInterproscan
PTHR45912CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47Interproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERSInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR43763XAA-PRO AMINOPEPTIDASE 1Interproscan
PTHR12920RYBP AND YAF2-RELATEDInterproscan
PTHR19858WD40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001006Molecular FunctionRNA polymerase III type 3 promoter sequence-specific DNA bindingInterproscan
GO:0019185Cellular ComponentsnRNA-activating protein complexInterproscan
GO:0042795Biological ProcesssnRNA transcription by RNA polymerase IIInterproscan
GO:0042796Biological ProcesssnRNA transcription by RNA polymerase IIIInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005793Cellular Componentendoplasmic reticulum-Golgi intermediate compartmentInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0007030Biological ProcessGolgi organizationInterproscan
GO:0030134Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0005375Molecular Functioncopper ion transmembrane transporter activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0035434Biological Processcopper ion transmembrane transportInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0000028Biological Processribosomal small subunit assemblyInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034388Cellular ComponentPwp2p-containing subcomplex of 90S preribosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08517SEC22; vesicle transport protein SEC22-Chromosome and associated proteinsko03036deepkoala
Membrane traffickingko04131deepkoala
Transportersko02000deepkoala
Membrane traffickingko04131deepkoala

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