Detailed information of g688.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002154618.3, uncharacterized protein LOC100199404 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8N0Z3Spindle and centriole-associated protein 1 OS=Homo sapiens OX=9606 GN=SPICE1 PE=1 SV=1
Q5RBY6Spindle and centriole-associated protein 1 OS=Pongo abelii OX=9601 GN=SPICE1 PE=2 SV=1
Q8C804Spindle and centriole-associated protein 1 OS=Mus musculus OX=10090 GN=Spice1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBAN

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF15678SPICECentriole duplication and mitotic chromosome congressionFamilyInterproscan
PF08600Rsm1Rsm1-likeDomainInterproscan
PF07967zf-C3HCC3HC zinc finger-like DomainInterproscan
PF03104DNA_pol_B_exo1DNA polymerase family B, exonuclease domainFamilyInterproscan
PF05193Peptidase_M16_CPeptidase M16 inactive domainDomainInterproscan
PF10036RLLRNA transcription, translation and transport factor proteinFamilyInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF00640PIDPhosphotyrosine interaction domain (PTB/PID)DomainInterproscan
PF00333Ribosomal_S5Ribosomal protein S5, N-terminal domainDomainInterproscan
PF02889Sec63Sec63 Brl domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050938FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR031387FamilySpindle and centriole-associated protein 1Interproscan
IPR013909DomainNuclear-interacting partner of ALK/Rsm1-like, C-terminalInterproscan
IPR036589Homologous_superfamilyHomocysteine-binding domain superfamilyInterproscan
IPR052238FamilySCF(NIPA) complex componentInterproscan
IPR012935DomainZinc finger, C3HC-likeInterproscan
IPR006133DomainDNA-directed DNA polymerase, family B, exonuclease domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR029703FamilyDNA polymerase epsilon catalytic subunitInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR007863DomainPeptidase M16, C-terminalInterproscan
IPR050626FamilyPeptidase M16Interproscan
IPR011249Homologous_superfamilyMetalloenzyme, LuxS/M16 peptidase-likeInterproscan
IPR019265FamilyRNA transcription, translation and transport factor proteinInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR001810DomainF-box domainInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR051230FamilyAmyloid-beta A4 Precursor Protein-BindingInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR006020DomainPTB/PI domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR000851FamilySmall ribosomal subunit protein uS5Interproscan
IPR013810DomainSmall ribosomal subunit protein uS5, N-terminalInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR004179DomainSec63 domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456SI:CH211-266K2.1Interproscan
PTHR31167SPINDLE AND CENTRIOLE ASSOCIATED PROTEIN 1 SPICE1Interproscan
PTHR15835NUCLEAR-INTERACTING PARTNER OF ALKInterproscan
PTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT AInterproscan
PTHR43690NARDILYSINInterproscan
PTHR15924CLEInterproscan
PTHR13318UNCHARACTERIZEDInterproscan
PTHR12345SYNTENIN RELATEDInterproscan
PTHR48277MITOCHONDRIAL RIBOSOMAL PROTEIN S5Interproscan
PTHR24075SEC63 DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0090307Biological Processmitotic spindle assemblyInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0005819Cellular ComponentspindleInterproscan
GO:0046599Biological Processregulation of centriole replicationInterproscan
GO:0051310Biological Processmetaphase chromosome alignmentInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006272Biological Processleading strand elongationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006287Biological Processbase-excision repair, gap-fillingInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0008310Molecular Functionsingle-stranded DNA 3'-5' DNA exonuclease activityInterproscan
GO:0008622Cellular Componentepsilon DNA polymerase complexInterproscan
GO:0045004Biological ProcessDNA replication proofreadingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0072669Cellular ComponenttRNA-splicing ligase complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0043197Cellular Componentdendritic spineInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0000388Biological Processspliceosome conformational change to release U4 (or U4atac) and U1 (or U11)Interproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15433CGI99, CLE7, RLLM1; RLL motif containing protein 1-Chromosome and associated proteinsko03036deepkoala

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