Detailed information of g69.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBU2644008.1, hypothetical protein [bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
F2K0794-hydroxybenzoate brominase (decarboxylating) OS=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) OX=717774 GN=bmp5 PE=1 SV=1
V4HM834-hydroxybenzoate brominase (decarboxylating) OS=Pseudoalteromonas luteoviolacea (strain 2ta16) OX=1353533 GN=bmp5 PE=1 SV=1
Q94BV5Flavin-containing monooxygenase FMO GS-OX-like 4 OS=Arabidopsis thaliana OX=3702 GN=At1g62600 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyMYB
Transcription Factors FamilyTSC22

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF13456RVT_3Reverse transcriptase-likeDomainInterproscan
PF02847MA3MA3 domainRepeatInterproscan
PF00743FMO-likeFlavin-binding monooxygenase-likeFamilyInterproscan
PF13688Reprolysin_5Metallo-peptidase family M12FamilyInterproscan
PF21299ADAM10_Cys-richADAM10, cysteine-rich domainDomainInterproscan
PF00514ArmArmadillo/beta-catenin-like repeatRepeatInterproscan
PF16186Arm_3Atypical Arm repeat RepeatInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13520AA_permease_2Amino acid permeaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037830FamilyZZ-type zinc finger-containing protein 3Interproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR017930DomainMyb domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR002156DomainRibonuclease H domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR003891DomainInitiation factor eIF-4 gamma, MA3Interproscan
IPR039778FamilyProgrammed cell death protein 4Interproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR000960FamilyFlavin monooxygenase FMOInterproscan
IPR020946FamilyFlavin monooxygenase-likeInterproscan
IPR050346FamilyFlavin-containing MonooxygenasesInterproscan
IPR001762DomainDisintegrin domainInterproscan
IPR051489FamilyDisintegrin and Metalloproteinase Domain-ContainingInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR049038DomainADAM10, cysteine-rich domainInterproscan
IPR036436Homologous_superfamilyDisintegrin domain superfamilyInterproscan
IPR024931FamilyImportin subunit alphaInterproscan
IPR000225RepeatArmadilloInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR032413RepeatAtypical Arm repeatInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR002293FamilyAmino acid/polyamine transporter IInterproscan
IPR004842FamilySLC12A transporter familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22705ZINC FINGER, ZZ DOMAIN CONTAINING 3Interproscan
PTHR12626PROGRAMMED CELL DEATH 4Interproscan
PTHR23023DIMETHYLANILINE MONOOXYGENASEInterproscan
PTHR45702ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBERInterproscan
PTHR23316IMPORTIN ALPHAInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46745TSC22 DOMAIN FAMILY PROTEIN 1Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR11827SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0004499Molecular FunctionN,N-dimethylaniline monooxygenase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006509Biological Processmembrane protein ectodomain proteolysisInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0061608Molecular Functionnuclear import signal receptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006607Biological ProcessNLS-bearing protein import into nucleusInterproscan
GO:0008139Molecular Functionnuclear localization sequence bindingInterproscan
GO:0008284Biological Processpositive regulation of cell population proliferationInterproscan
GO:0043066Biological Processnegative regulation of apoptotic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0006884Biological Processcell volume homeostasisInterproscan
GO:0015377Molecular Functionchloride:monoatomic cation symporter activityInterproscan
GO:0015379Molecular Functionpotassium:chloride symporter activityInterproscan
GO:0055064Biological Processchloride ion homeostasisInterproscan
GO:0055075Biological Processpotassium ion homeostasisInterproscan
GO:1902476Biological Processchloride transmembrane transportInterproscan
GO:1990573Biological Processpotassium ion import across plasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15042KPNA5_6; importin subunit alpha-6/7-CD moleculesko04090deepkoala
Proteoglycans in cancerko05205deepkoala
Chromosome and associated proteinsko03036deepkoala

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