Gene detail

Detailed information of g695.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002167014.4, SPARC-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P34714	SPARC OS=Caenorhabditis elegans OX=6239 GN=ost-1 PE=1 SV=1
Q9U943	Apolipophorins OS=Locusta migratoria OX=7004 PE=1 SV=2
E9Q414	Apolipoprotein B-100 OS=Mus musculus OX=10090 GN=Apob PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04756	OST3_OST6	OST3 / OST6 family, transporter family	Family	Interproscan
PF02785	Biotin_carb_C	Biotin carboxylase C-terminal domain	Domain	Interproscan
PF02786	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan
PF00334	NDK	Nucleoside diphosphate kinase	Domain	Interproscan
PF10591	SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	Domain	Interproscan
PF00481	PP2C	Protein phosphatase 2C	Family	Interproscan
PF00094	VWD	von Willebrand factor type D domain	Domain	Interproscan
PF09172	Vit_open_b-sht	Vitellinogen, open beta-sheet	Domain	Interproscan
PF01347	Vitellogenin_N	Lipoprotein amino terminal region	Repeat	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036249	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR021149	Family	Oligosaccharyl transferase complex, subunit OST3/OST6	Interproscan
IPR011764	Domain	Biotin carboxylation domain	Interproscan
IPR005482	Domain	Biotin carboxylase, C-terminal	Interproscan
IPR011054	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR005479	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR050856	Family	Biotin-dependent Carboxylase Complex	Interproscan
IPR034907	Domain	Nucleoside diphosphate kinase-like domain	Interproscan
IPR036850	Homologous_superfamily	Nucleoside diphosphate kinase-like domain superfamily	Interproscan
IPR001564	Family	Nucleoside diphosphate kinase	Interproscan
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR019577	Domain	SPARC/Testican, calcium-binding domain	Interproscan
IPR002350	Domain	Kazal domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR036457	Homologous_superfamily	PPM-type phosphatase-like domain superfamily	Interproscan
IPR001932	Domain	PPM-type phosphatase-like domain	Interproscan
IPR015655	Family	Protein phosphatase 2C	Interproscan
IPR015255	Domain	Vitellinogen, open beta-sheet	Interproscan
IPR050733	Family	Vitellogenin/Apolipophorin	Interproscan
IPR001846	Domain	von Willebrand factor, type D domain	Interproscan
IPR011030	Homologous_superfamily	Lipovitellin-phosvitin complex, superhelical domain	Interproscan
IPR001747	Domain	Vitellogenin, N-terminal	Interproscan
IPR015819	Homologous_superfamily	Lipid transport protein, beta-sheet shell	Interproscan
IPR015817	Homologous_superfamily	Vitellinogen, open beta-sheet, subdomain 1	Interproscan
IPR015816	Homologous_superfamily	Vitellinogen, beta-sheet N-terminal	Interproscan
IPR051521	Family	tRNA Modification and Golgi Maintenance Protein	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR12692	DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATED	Interproscan
PTHR18866	CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE	Interproscan
PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	Interproscan
PTHR13866	SPARC OSTEONECTIN	Interproscan
PTHR13832	PROTEIN PHOSPHATASE 2C	Interproscan
PTHR23345	VITELLOGENIN-RELATED	Interproscan
PTHR15627	NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008250	Cellular Component	oligosaccharyltransferase complex	Interproscan
GO:0018279	Biological Process	protein N-linked glycosylation via asparagine	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004658	Molecular Function	propionyl-CoA carboxylase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0004550	Molecular Function	nucleoside diphosphate kinase activity	Interproscan
GO:0006183	Biological Process	GTP biosynthetic process	Interproscan
GO:0006228	Biological Process	UTP biosynthetic process	Interproscan
GO:0006241	Biological Process	CTP biosynthetic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005518	Molecular Function	collagen binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0048856	Biological Process	anatomical structure development	Interproscan
GO:0050840	Molecular Function	extracellular matrix binding	Interproscan
GO:0004722	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0005319	Molecular Function	lipid transporter activity	Interproscan
GO:0006869	Biological Process	lipid transport	Interproscan
GO:0005794	Cellular Component	Golgi apparatus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14388	SLC5A8_12, SMCT; solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12	-	Chaperones and folding catalysts	ko03110	deepkoala
			Transporters	ko02000	deepkoala
			Transporters	ko02000	deepkoala