Detailed information of g696.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3039345.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9JKB1Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus OX=10090 GN=Uchl3 PE=1 SV=2
P15374Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens OX=9606 GN=UCHL3 PE=1 SV=1
Q2TBG8Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus OX=9913 GN=UCHL3 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyDUB|UCH|UCH
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF01088Peptidase_C12Ubiquitin carboxyl-terminal hydrolase, family 1DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF02126PTEPhosphotriesterase familyDomainInterproscan
PF10264Stork_headWinged helix Storkhead-box1 domainFamilyInterproscan
PF08213COX24_CMitochondrial mRNA-processing protein COX24, C-terminalDomainInterproscan
PF00834Ribul_P_3_epimRibulose-phosphate 3 epimerase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR046336Homologous_superfamilyLon protease, N-terminal domain superfamilyInterproscan
IPR027065FamilyLon proteaseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001578DomainPeptidase C12, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR036959Homologous_superfamilyPeptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR051959FamilyPAK1 Kinase RegulatorInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001559FamilyPhosphotriesteraseInterproscan
IPR032466Homologous_superfamilyMetal-dependent hydrolaseInterproscan
IPR019391DomainStorkhead-box protein, winged-helix domainInterproscan
IPR040126FamilyStorkhead-box protein 1/2Interproscan
IPR013177DomainRibosomal protein mS38, C-terminalInterproscan
IPR052284FamilyCollagen-modifying leprecan proteinInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR011060Homologous_superfamilyRibulose-phosphate binding barrelInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR000056FamilyRibulose-phosphate 3-epimerase-likeInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10046ATP DEPENDENT LON PROTEASE FAMILY MEMBERInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10589UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan
PTHR44675PAK1 INTERACTING PROTEIN 1Interproscan
PTHR10819PHOSPHOTRIESTERASE-RELATEDInterproscan
PTHR22437WINGED HELIX DOMAIN-CONTAINING PROTEINInterproscan
PTHR13986PROTEIN LYSINE HYDROXYLATION COMPLEX COMPONENTInterproscan
PTHR11749RIBULOSE-5-PHOSPHATE-3-EPIMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0004176Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005782Cellular Componentperoxisomal matrixInterproscan
GO:0006625Biological Processprotein targeting to peroxisomeInterproscan
GO:0016485Biological Processprotein processingInterproscan
GO:0030163Biological Processprotein catabolic processInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0009056Biological Processcatabolic processInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005518Molecular Functioncollagen bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0030199Biological Processcollagen fibril organizationInterproscan
GO:0004750Molecular FunctionD-ribulose-phosphate 3-epimerase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0009052Biological Processpentose-phosphate shunt, non-oxidative branchInterproscan
GO:0016857Molecular Functionracemase and epimerase activity, acting on carbohydrates and derivativesInterproscan
GO:0044262Biological Processobsolete cellular carbohydrate metabolic processInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07048PTER, php; phosphotriesterase-related protein-Ubiquitin systemko04121deepkoala
Ribosome biogenesisko03009deepkoala
Carbon fixation in photosynthetic organismsko00710deepkoala
General function prediction only-deepkoala

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