Gene detail

Detailed information of g698.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: ALJ33577.1, MIST-a [Clytia hemisphaerica]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q15784	Neurogenic differentiation factor 2 OS=Homo sapiens OX=9606 GN=NEUROD2 PE=1 SV=2
Q63689	Neurogenic differentiation factor 2 OS=Rattus norvegicus OX=10116 GN=Neurod2 PE=1 SV=2
Q62414	Neurogenic differentiation factor 2 OS=Mus musculus OX=10090 GN=Neurod2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000053 (this species only)
Orthogroup (gene family)	OG0000114 (this species only)
Orthogroup (gene family)	OG0000481 (this species only)
Orthogroup (gene family)	OG0000635 (this species only)
Orthogroup (gene family)	OG0002047 (this species only)
Orthogroup (gene family)	OG0002811 (this species only)
Orthogroup (gene family)	OG0006112 (this species only)
Orthogroup (gene family)	OG0006114 (this species only)
Orthogroup (gene family)	OG0013096 (this species only)
Orthogroup (gene family)	OG0041312 (this species only)
Orthogroup (gene family)	OG0080406 (this species only)
Orthogroup (gene family)	OG0080678 (this species only)
Orthogroup (gene family)	OG0170724 (this species only)
Orthogroup (gene family)	OG0172112 (this species only)
Orthogroup (gene family)	OG0172546 (this species only)
Transcription factor family	bHLH · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05712 all species →	MRG	MRG	Family	Interproscan
PF11717 all species →	Tudor-knot	RNA binding activity-knot of a chromodomain	Family	Interproscan
PF00561 all species →	Abhydrolase_1	alpha/beta hydrolase fold	Domain	Interproscan
PF09445 all species →	Methyltransf_15	RNA cap guanine-N2 methyltransferase	Family	Interproscan
PF00010 all species →	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan
PF01757 all species →	Acyl_transf_3	Acyltransferase family	Family	Interproscan
PF20146 all species →	NRF	Nose resistant-to-fluoxetine protein, N-terminal domain	Domain	Interproscan
PF00049 all species →	Insulin	Insulin/IGF/Relaxin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038217 all species →	Homologous_superfamily	MRG, C-terminal domain superfamily	Interproscan
IPR026541 all species →	Domain	MRG domain	Interproscan
IPR008676 all species →	Family	MRG	Interproscan
IPR016197 all species →	Homologous_superfamily	Chromo-like domain superfamily	Interproscan
IPR025995 all species →	Domain	RNA binding activity-knot of a chromodomain	Interproscan
IPR000073 all species →	Domain	Alpha/beta hydrolase fold-1	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR019012 all species →	Family	RNA cap guanine-N2 methyltransferase	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR036638 all species →	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR011598 all species →	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR050359 all species →	Family	Basic helix-loop-helix transcription factors	Interproscan
IPR052728 all species →	Family	Oxygen and lipid transport regulator	Interproscan
IPR006621 all species →	Domain	Nose resistant-to-fluoxetine protein, N-terminal	Interproscan
IPR002656 all species →	Domain	Acyltransferase 3 domain	Interproscan
IPR016179 all species →	Domain	Insulin-like	Interproscan
IPR022352 all species →	Family	Insulin family	Interproscan
IPR036438 all species →	Homologous_superfamily	Insulin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10880 all species →	MORTALITY FACTOR 4-LIKE PROTEIN	Interproscan
PTHR43329 all species →	EPOXIDE HYDROLASE	Interproscan
PTHR14741 all species →	S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED	Interproscan
PTHR19290 all species →	BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED	Interproscan
PTHR11161 all species →	O-ACYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000123 all species →	Cellular Component	histone acetyltransferase complex	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006325 all species →	Biological Process	chromatin organization	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0016573 all species →	Biological Process	obsolete histone acetylation	Interproscan
GO:0035267 all species →	Cellular Component	NuA4 histone acetyltransferase complex	Interproscan
GO:0043967 all species →	Biological Process	obsolete histone H4 acetylation	Interproscan
GO:0043968 all species →	Biological Process	obsolete histone H2A acetylation	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0001510 all species →	Biological Process	RNA methylation	Interproscan
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0036261 all species →	Biological Process	7-methylguanosine cap hypermethylation	Interproscan
GO:0071164 all species →	Molecular Function	RNA cap trimethylguanosine synthase activity	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0016747 all species →	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0005179 all species →	Molecular Function	hormone activity	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11339	MORF4L1, MRG15, EAF3; mortality factor 4-like protein 1	-	DNA repair and recombination proteins	ko03400	deepkoala
K14292	TGS1; trimethylguanosine synthase	EC:2.1.1.-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.