Detailed information of g70.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBU2510913.1, flagellar hook-associated protein FlgK [bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P96501Flagellar hook-associated protein 3 OS=Bacillus subtilis (strain 168) OX=224308 GN=flgL PE=3 SV=1
F2K0794-hydroxybenzoate brominase (decarboxylating) OS=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) OX=717774 GN=bmp5 PE=1 SV=1
A0A2I2F2K8Monooxygenase cfoE OS=Aspergillus candidus OX=41067 GN=cfoE PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13234MTR4_beta-barrelMtr4-like, beta-barrel domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF21408MTR4-like_stalkExosome RNA helicase MTR4-like, stalkDomainInterproscan
PF17911Ski2_NSki2 N-terminal regionDomainInterproscan
PF08148DSHCTDSHCT (NUC185) domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF03178CPSF_ACPSF A subunit regionRepeatInterproscan
PF02179BAGBAG domainFamilyInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00669Flagellin_NBacterial flagellin N-terminal helical regionFamilyInterproscan
PF00700Flagellin_CBacterial flagellin C-terminal helical regionFamilyInterproscan
PF00743FMO-likeFlavin-binding monooxygenase-likeFamilyInterproscan
PF03370CBM_21Carbohydrate/starch-binding module (family 21)DomainInterproscan
PF16046FAM76FAM76 proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050699FamilyRNA/DNA HelicaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR025696DomainExosome RNA helicase MTR4-like, beta-barrel domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR048392DomainExosome RNA helicase MTR4-like, stalkInterproscan
IPR016438FamilyATP-dependent RNA helicase SKI2-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR040801DomainSki2, N-terminal domainInterproscan
IPR012961DomainATP-dependent RNA helicase Ski2/MTR4, C-terminalInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050358FamilyRSE1/DDB1/CFT1/CPSF1Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR004871DomainCleavage/polyadenylation specificity factor, A subunit, C-terminalInterproscan
IPR036533Homologous_superfamilyBAG domain superfamilyInterproscan
IPR003103DomainBAG domainInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR050285FamilySTE20 Serine/Threonine-Protein KinaseInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR002371FamilyFlagellar hook-associated protein 1Interproscan
IPR001029DomainFlagellin, N-terminal domainInterproscan
IPR046358DomainFlagellin, C-terminal domainInterproscan
IPR020946FamilyFlavin monooxygenase-likeInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR000960FamilyFlavin monooxygenase FMOInterproscan
IPR050346FamilyFlavin-containing MonooxygenasesInterproscan
IPR038175Homologous_superfamilyCBM21 domain superfamilyInterproscan
IPR050782FamilyProtein phosphatase 1 regulatory subunit 3Interproscan
IPR005036DomainCBM21 (carbohydrate binding type-21) domainInterproscan
IPR032017FamilyFAM76 proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12131ATP-DEPENDENT RNA AND DNA HELICASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan
PTHR48015SERINE/THREONINE-PROTEIN KINASE TAOInterproscan
PTHR24203ANKYRIN REPEAT FAMILY PROTEINInterproscan
PTHR30033FLAGELLAR HOOK-ASSOCIATED PROTEIN 1Interproscan
PTHR23023DIMETHYLANILINE MONOOXYGENASEInterproscan
PTHR12307PROTEIN PHOSPHATASE 1 REGULATORY SUBUNITInterproscan
PTHR46176LD21662PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0055087Cellular ComponentSki complexInterproscan
GO:0070478Biological Processnuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decayInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0051087Molecular Functionprotein-folding chaperone bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0023014Biological Processsignal transductionInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0043408Biological Processregulation of MAPK cascadeInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0009424Cellular Componentbacterial-type flagellum hookInterproscan
GO:0044780Biological Processbacterial-type flagellum assemblyInterproscan
GO:0004499Molecular FunctionN,N-dimethylaniline monooxygenase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0000164Cellular Componentprotein phosphatase type 1 complexInterproscan
GO:0005979Biological Processregulation of glycogen biosynthetic processInterproscan
GO:0008157Molecular Functionprotein phosphatase 1 bindingInterproscan
GO:2001069Molecular Functionglycogen bindingInterproscan
GO:0016607Cellular Componentnuclear speckInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04412STK3, MST2; serine/threonine kinase 3-Drug metabolism - cytochrome P450ko00982deepkoala
Messenger RNA biogenesisko03019deepkoala
Protein phosphatases and associated proteinsko01009deepkoala
Protein kinasesko01001deepkoala

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