Detailed information of g700.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_019645918.1, PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial-like [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
F1N206Dihydrolipoyl dehydrogenase, mitochondrial OS=Bos taurus OX=9913 GN=DLD PE=1 SV=2
P09622Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=DLD PE=1 SV=2
Q60HG3Dihydrolipoyl dehydrogenase, mitochondrial OS=Macaca fascicularis OX=9541 GN=DLD PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyUBD|Other|Jab_MPN
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06602Myotub-relatedMyotubularin-like phosphatase domainDomainInterproscan
PF07992Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan
PF02852Pyr_redox_dimPyridine nucleotide-disulphide oxidoreductase, dimerisation domainDomainInterproscan
PF08969USP8_dimerUSP8 dimerisation domainDomainInterproscan
PF01398JABJAB1/Mov34/MPN/PAD-1 ubiquitin proteaseFamilyInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF08357SEFIRSEFIR domainFamilyInterproscan
PF14214Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF21530Pif1_2B_domDNA helicase Pif1, 2B domainDomainInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR010569DomainMyotubularin-like, phosphatase domainInterproscan
IPR030564FamilyMyotubularin familyInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR016156Homologous_superfamilyFAD/NAD-linked reductase, dimerisation domain superfamilyInterproscan
IPR012999Active_sitePyridine nucleotide-disulphide oxidoreductase, class I, active siteInterproscan
IPR001100FamilyPyridine nucleotide-disulphide oxidoreductase, class IInterproscan
IPR023753DomainFAD/NAD(P)-binding domainInterproscan
IPR050151FamilyClass-I pyridine nucleotide-disulfide oxidoreductaseInterproscan
IPR004099DomainPyridine nucleotide-disulphide oxidoreductase, dimerisation domainInterproscan
IPR006258FamilyDihydrolipoamide dehydrogenaseInterproscan
IPR029034Homologous_superfamilyCystine-knot cytokineInterproscan
IPR037518DomainMPN domainInterproscan
IPR044098DomainSTAMBP/STALP-like, MPN domainInterproscan
IPR000555DomainJAB1/MPN/MOV34 metalloenzyme domainInterproscan
IPR015063DomainUSP8 dimerisation domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR000907FamilyLipoxygenaseInterproscan
IPR036226Homologous_superfamilyLipoxigenase, C-terminal domain superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR013819DomainLipoxygenase, C-terminalInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR013568DomainSEFIR domainInterproscan
IPR053047FamilyE3 ubiquitin ligase TRAF3IP2Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR025476DomainHelitron helicase-like domainInterproscan
IPR049163DomainDNA helicase Pif1-like, 2B domainInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR050474FamilyHelicase Hel308/SKI2Interproscan
IPR039241FamilyRibosomal RNA-processing protein Rrp9-likeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13318UNCHARACTERIZEDInterproscan
PTHR10807MYOTUBULARIN-RELATEDInterproscan
PTHR22912DISULFIDE OXIDOREDUCTASEInterproscan
PTHR12947AMSH-LIKE PROTEASEInterproscan
PTHR11771LIPOXYGENASEInterproscan
PTHR19854TRANSDUCIN BETA-LIKE 3Interproscan
PTHR34257ADAPTER PROTEIN CIKSInterproscan
PTHR45786DNA BINDING PROTEIN-LIKEInterproscan
PTHR47961DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATEDInterproscan
PTHR19865U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0016668Molecular Functionoxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptorInterproscan
GO:0004148Molecular Functiondihydrolipoyl dehydrogenase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0045252Cellular Componentoxoglutarate dehydrogenase complexInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0061578Molecular FunctionK63-linked deubiquitinase activityInterproscan
GO:0070536Biological Processprotein K63-linked deubiquitinationInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0140492Molecular Functionmetal-dependent deubiquitinase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008233Molecular Functionpeptidase activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0034440Biological Processlipid oxidationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000472Biological Processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000480Biological Processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan
GO:0006959Biological Processhumoral immune responseInterproscan
GO:0043123Biological Processpositive regulation of canonical NF-kappaB signal transductionInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11866STAMBP, AMSH; STAM-binding proteinEC:3.4.19.12
Exosomeko04147deepkoala
Ubiquitin systemko04121deepkoala

TOP