Gene detail

Detailed information of g7053.t1 in Montipora capitata

Genomic Location: Sc0000157:85312...98149
NR annotation: XP_044177166.1, phosphoribosylformylglycinamidine synthase-like [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g7053.t1

atggcggagtgcagcattcttcgattttatagtttccctggattgtcgccaggacggcatagtgttactttgtccaagctgaaatcagtgtcttctcgtttcacagtgagtgacttatcgactgaaatatgctataatctcagtgtgcgaggaaattgcctgaactctgatgaacttgagaacttgatgtggctgttgaacgattctttcgggaaagaactcgtccgtcaaacttcgttcttggatgaagtcacagaaacagacaattgcggcaatgtcttgatagaaatcggtccaagacttaatttttcgaccgcttggtcaacgaatgccgtatcgatttgtcgctccatagggttggaacggattgatcgaatcgagagatcttgtcgctatttgattcaattgagccctaaagatgattccagtcaagtcacgaaggaggacgaaaatacttttgctgcaaaactacacgatagaatgacggagtgtcgttatgaaaagccgttaacgagttttgagatcaacgtacaaaccgaagaatgttatgaggtggatgtattaaatgaaggtcgcccagcattggagaaagttaaccgacatcttggtttggcatttgacgattgggatctggactattataccaagttattcaaagagagggttttcagaaacccaaccagcgtagagtgctttgatttggcacagtcaaacagcgagcattcacgccattggttcttcaaaggaagattggtagttgatggatatgaactaaaagattctctgatgaagatggtgatgagaacacaggaaacaagcaatgataatagtgttattaaatttagcgacaacagcagtgctataaagggttatgaagtttccctactattgccggaaaactatggagaagctgccaaatttcaattaaagcaaaactgcacaaggcacatcatcttcacagctgaaacccataattttccaacaggcgtggcaccatttcctggagcaacaacaggaactggaggacgtataagagatgtacaggctgctggcaggggagcacatgttgttgctggtactgctggctactgctttggaaatcttcacattccaggttatgagcttccatgggaagatagcaagtttgtgtatccaaacaacatggctctgcctttagagatcgctgtagaagcaagcaatggggcttcagattatggaaataagtttggagaacctgttcttgctgggtttgcccgatcttttggaatgatgttgccaagtggggaacggcgtgaatgggtgaagccaataatgttcagtggtggaattggaatgattgatgatgaaggagtcattaaacttcagccagcgaaaggcatgtcagttgtcaaggttggtgggcctgtatatcgaattggtgttggtggtggtgcagcctcttccatccaggttcagggagataacgagtcagagctggactttggagcagttcaacggggggatgcagaaatggagcagaagctgaaccgagccattagggcctgtattgaaatgggttcaaagaatccaatatgcagcattcacgaccagggagcaggaggcaatgggaatgttttgaaagagatatcagagcctgctggagccattattcatgtcaaagatttcatccttggtgatccaactatttctgtgcttgagctgtggggtgcagagtatcaggaaagtaatgctttattggtgcaggaggaaaacaggcatgtcttgcaaagcatttgtgacagagaaaaagtgccagtgtcctttgttgggcagatcacaggtgatggaaaaattgtgttggaagatgatactgtgtcctcgagtaatggtctgctgctagaggaaaatggtgtgccaaacaagcgacagcgaataactcaacctgtggacttggaacttgaagttgtgttgggcaaaatgccacaaaaggtctttaacttggagaggttacagtcaaaagttgagccattaagattaggatctgatctcacagtaaaggaaatgttggatagagttttacgcttgccatcagttgccagcaagagatatctcacaaacaaggtaaacattgtattattcactaagttgtga

Transcript

g7053.t1

ATGGCGGAGTGCAGCATTCTTCGATTTTATAGTTTCCCTGGATTGTCGCCAGGACGGCATAGTGTTACTTTGTCCAAGCTGAAATCAGTGTCTTCTCGTTTCACAGTGAGTGACTTATCGACTGAAATATGCTATAATCTCAGTGTGCGAGGAAATTGCCTGAACTCTGATGAACTTGAGAACTTGATGTGGCTGTTGAACGATTCTTTCGGGAAAGAACTCGTCCGTCAAACTTCGTTCTTGGATGAAGTCACAGAAACAGACAATTGCGGCAATGTCTTGATAGAAATCGGTCCAAGACTTAATTTTTCGACCGCTTGGTCAACGAATGCCGTATCGATTTGTCGCTCCATAGGGTTGGAACGGATTGATCGAATCGAGAGATCTTGTCGCTATTTGATTCAATTGAGCCCTAAAGATGATTCCAGTCAAGTCACGAAGGAGGACGAAAATACTTTTGCTGCAAAACTACACGATAGAATGACGGAGTGTCGTTATGAAAAGCCGTTAACGAGTTTTGAGATCAACGTACAAACCGAAGAATGTTATGAGGTGGATGTATTAAATGAAGGTCGCCCAGCATTGGAGAAAGTTAACCGACATCTTGGTTTGGCATTTGACGATTGGGATCTGGACTATTATACCAAGTTATTCAAAGAGAGGGTTTTCAGAAACCCAACCAGCGTAGAGTGCTTTGATTTGGCACAGTCAAACAGCGAGCATTCACGCCATTGGTTCTTCAAAGGAAGATTGGTAGTTGATGGATATGAACTAAAAGATTCTCTGATGAAGATGGTGATGAGAACACAGGAAACAAGCAATGATAATAGTGTTATTAAATTTAGCGACAACAGCAGtgCTATAAAGGGTTATGAAGTTTCCCTACTATTGCCGGAAAACTATGGAGAAGCTGCCAAATTTCAATTAAAGCAAAACTGCACAAGGCACATCATCTTCACAGCTGAAACCCATAATTTTCCAACAGGCGTGGCACCATTTCCTGGAGCAACAACAGGAACTGGAGGACGTATAAGAGATGTACAGGCTGCTGGCAGGGGAGCACATGTTGTTGCTGGTACTGCTGGCTACTGCTTTGGAAATCTTCACATTCCAGGTTATGAGCTTCCATGGGAAGATAGCAAGTTTGTGTATCCAAACAACATGGCTCTGCCTTTAGAGATCGCTGTAGAAGCAAGCAATGGGGCTTCAGATTATGGAAATAAGTTTGGAGAACCTGTTCTTGCTGGGTTTGCCCGATCTTTTGGAATGATGTTGCCAAGTGGGGAACGGCGTGAATGGGTGAAGCCAATAATGTTCAGTGGTGGAATTGGAATGATTGATGATGAAGGAGTCATTAAACTTCAGCCAGCGAAAGGCATGTCAGTTGTCAAGGTTGGTGGGCCTGTATATCGAATTGGTGTTGGTGGTGGTGCAGCCTCTTCCATCCAGGTTCAGGGAGATAACGAGTCAGAGCTGGACTTTGGAGCAGTTCAACGGGGGGATGCAGAAATGGAGCAGAAGCTGAACCGAGCCATTAGGGCCTGTATTGAAATGGGTTCAAAGAATCCAATATGCAGCATTCACGACCAGGGAGCAGGAGGCAATGGGAATGTTTTGAAAGAGATATCAGAGCCTGCTGGAGCCATTATTCATGTCAAAGATTTCATCCTTGGTGATCCAACTATTTCTGTGCTTGAGCTGTGGGGTGCAGAGTATCAGGAAAGTAATGCTTTATTGGTGCAGGAGGAAAACAGGCATGTCTTGCAAAGCATTTGTGACAGAGAAAAAGTGCCAGTGTCCTTTGTTGGGCAGATCACAGGTGATGGAAAAATTGTGTTGGAAGATGATACTGTGTCCTCGAGTAATGGTCTGCTGCTAGAGGAAAATGGTGTGCCAAACAAGCGACAGCGAATAACTCAACCTGTGGACTTGGAACTTGAAGTTGTGTTGGGCAAAATGCCACAAAagGTCTTTAACTTGGAGAGGTTACAGTCAAAAGTTGAGCCATTAAGATTAGGATCTGATCTCACAGTAAAGGAAATGTTGGATAGAGTTTTACGCTTGCCATCAGTTGCCAGCAAGAGATATCTCACAAACAAGGTAAACATTGTATTATTCACTAAGTTGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5SUR0	Phosphoribosylformylglycinamidine synthase OS=Mus musculus OX=10090 GN=Pfas PE=1 SV=1
O15067	Phosphoribosylformylglycinamidine synthase OS=Homo sapiens OX=9606 GN=PFAS PE=1 SV=4
Q9M8D3	Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g74260 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004535 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18072 all species →	FGAR-AT_linker	Formylglycinamide ribonucleotide amidotransferase linker domain	Domain	Interproscan
PF02769 all species →	AIRS_C	AIR synthase related protein, C-terminal domain	Domain	Interproscan
PF18076 all species →	FGAR-AT_N	Formylglycinamide ribonucleotide amidotransferase N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041609 all species →	Domain	Phosphoribosylformylglycinamidine synthase, linker domain	Interproscan
IPR036921 all species →	Homologous_superfamily	PurM-like, N-terminal domain superfamily	Interproscan
IPR036676 all species →	Homologous_superfamily	PurM-like, C-terminal domain superfamily	Interproscan
IPR010918 all species →	Domain	PurM-like, C-terminal domain	Interproscan
IPR040707 all species →	Domain	Phosphoribosylformylglycinamidine synthase, N-terminal	Interproscan
IPR036604 all species →	Homologous_superfamily	Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10099 all species →	PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE	Interproscan

Gene Ontology

No Gene Ontology signature was detected for g7053.t1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g7053.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.