Gene detail

Detailed information of g7054.t1 in Montipora capitata

Genomic Location: Sc0000157:112270...117974
NR annotation: XP_044177166.1, phosphoribosylformylglycinamidine synthase-like [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g7054.t1

atgttggatagagttttacgcttgccatcagttgccagcaagagatatctcacaaacaaggttgatcgcagtgttacaggtcttgttgctcagcaacaatgtgtgggacccttacacacacctgtcgctgatgtagcagtcactgcgctgacatactttgacaatgttggttcagcaactgctattggtgaacagccaatcaagggcctagttgatcccgcttgtggggctcgaatggctgtgggagaagctctgacaaatttagtgtttgcaagaataactgatttaaaggatgtaaagtgcagtgctaattggatgtggccggcaaagttaccaggagaaggtgctgccctgtacgatgcttgtgcagcaatgtgcaatgtcatgtcacatcttggtattgctgtagatggggggaaagattccctaagcatggcagcaagagttggcagtgaaactgttaaggctcctggttctctggtgatttcagtctatgcgtcatgtcctgatgttcgtgcaacaatcacacctgacctcaagatcccagatggaggagcgaatctgctgtgggtaaaatttggctgtgatgacaaattcaggctgggaggaagtgcattagctcaggtgtataatcagctgggaagtgaatcgcctgatttagacgatgcaaagaccttcaaagcagcatttagaaccacccaggaactgttagcgcaagaccttattttgtctggtcatgacatcagtgatggtgggttaattaccacaatcttggaaatggcctttgccggaaactgtggccttacagttgacgttccctgcccagatatcttcacttttacagtgaacaaggcagctgatgttctttttgcagaagaacttgggattatcttggaaatcaaagattgcaacactgaggaggttgtcaatgccttctgcgagaagaaagttccttgttaccaaattggcaaggcaaatggaatgggcaaagatgccattgtgtcactcagtgttgggggtgagcttgtgttagagcagagcatggttgatttgcgagatatgtgggaagcaacaagtttccacttggagaggctacagtcaaacccacagtgtgttaaggaagaagaagctggacttcgtaagaggtttgcaccaatgtacaagttgtcatttgacccaaagctaatagttccatcaaagaagaatgacatccaccccaaagtggctatcattcgagaagagggtagcaatggtgacagggagatggtggcaagctttcacatggcagggtttgaaacatgggatgtgacaatgaatgatctgtgcacaggggcagtgtcccttgaggaattccgtggtgcagtatttgtgggtggcttcagttatgctgatgtgcttggttctgccaagggttgggctgcagtgtgcaagataaacgccactgttcgtgctcagttggatgccttcttctccagatcagacacctttagcttaggagtgtgcaacggctgccaactgatgggattgcttggttgggttggtcaagatgttgatgctcccgatgagggtagtttgcagcagggagttcactttactcacaacacctctgagagatttgaatctcggtttgtaacggtggcaatccagcccagccctgctatgatgcttagtggcatggaaggatctacattgggaatatgggtagcacacggcgaaggacggattcaattcagtagtaattttgtgcttcagaatatcatggccaacaaacttgttcctctgcgttacgttgatgatgaaggctgcccaacaactcaatacccactgaatccaaatgggtcccctgagggaattgctggtctgtgctctccagatgggcgacaccttgccatgatgccccacccagaaaggtgtacattactttggcagtggccttggatgcctttagattggaaaaactctatcaaggcatcaccttggttaaaaatgtttcaaaatgcctacaaatggtgcatagagacttga

Transcript

g7054.t1

ATGTTGGATAGAGTTTTACGCTTGCCATCAGTTGCCAGCAAGAGATATCTCACAAACAAGGTTGATCGCAGTGTTACAGGTCTTGTTGCTCAGCAACAATGTGTGGGACCCTTACACACACCTGTCGCTGATGTAGCAGTCACTGCGCTGACATACTTTGACAATGTTGGTTCAGCAACTGCTATTGGTGAACAGCCAATCAAGGGCCTAGTTGATCCCGCTTGTGGGGCTCGAATGGCTGTGGGAGAAGCTCTGACAAATTTAGTGTTTGCAAGAATAACTGATTTAAAGGATGTAAAGTGCAGTGCTAATTGGATGTGGCCGGCAAAGTTACCAGGAGAAGGTGCTGCCCTGTACGATGCTTGTGCAGCAATGTGCAATGTCATGTCACATCTTGGTATTGCTGTAGATGGGGGGAAAGATTCCCTAAGCATGGCAGCAAGAGTTGGCAGTGAAACTGTTAAGGCTCCTGGTTCTCTGGTGATTTCAGTCTATGCGTCATGTCCTGATGTTCGTGCAACAATCACACCTGACCTCAAGATCCCAGATGGAGGAGCGAATCTGCTGTGGGTAAAATTTGGCTGTGATGACAAATTCAGGCTGGGAGGAAGTGCATTAGCTCAGGTGTATAATCAGCTGGGAAGTGAATCGCCTGATTTAGACGATGCAAAGACCTTCAAAGCAGCATTTAGAACCACCCAGGAACTGTTAGCGCAAGACCTTATTTTGTCTGGTCATGACATCAGTGATGGTGGGTTAATTACCACAATCTTGGAAATGGCCTTTGCCGGAAACTGTGGCCTTACAGTTGACGTTCCCTGCCCAGATATCTTCACTTTTACAGTGAACAAGGCAGCTGATGTTCTTTTTGCAGAAGAACTTGGGATTATCTTGGAAATCAAAGATTGCAACACTGAGGAGGTTGTCAATGCCTTCTGCGAGAAGAAAGTTCCTTGTTACCAAATTGGCAAGGCAAATGGAATGGGCAAAGATGCCATTGTGTCACTCAGTGTTGGGGGTGAGCTTGTGTTAGAGCAGAGCATGGTTGATTTGCGAGATATGTGGGAAGCAACAAGTTTCCACTTGGAGAGGCTACAGTCAAACCCACAGTGTGTTAAGGAAGAAGAAGCTGGACTTCGTAAGAGGTTTGCACCAATGTACAAGTTGTCATTTGACCCAAAGCTAATAGTTCCATCAAAGAAGAATGACATCCACCCCAAAGTGGCTATCATTCGAGAAGAGGGTAGCAATGGTGACAGGGAGATGGTGGCAAGCTTTCACATGGCAGGGTTTGAAACATGGGATGTGACAATGAATGATCTGTGCACAGGGGCAGTGTCCCTTGAGGAATTCCGTGGTGCAGTATTTGTGGGTGGCTTCAGTTATGCTGATGTGCTTGGTTCTGCCAAGGGTTGGGCTGCAGTGTGCAAGATAAACGCCACTGTTCGTGCTCAGTTGGATGCCTTCTTCTCCAGATCAGACACCTTTAGCTTAGGAGTGTGCAACGGCTGCCAACTGATGGGATTGCTTGGTTGGGTTGGTCAAGATGTTGATGCTCCCGATGAGGGTAGTTTGCAGCAGGGAGTTCACTTTACTCACAACACCTCTGAGAGATTTGAATCTCGGTTTGTAACGGTGGCAATCCAGCCCAGCCCTGCTATGATGCTTAGTGGCATGGAAGGATCTACATTGGGAATATGGGTAGCACACGGCGAAGGACGGATTCAATTCAGTAGTAATTTTGTGCTTCAGAATATCATGGCCAACAAACTTGTTCCTCTGCGTTACGTTGATGATGAAGGCTGCCCAACAACTCAATACCCACTGAATCCAAATGGGTCCCCTGAGGGAATTGCTGGTCTGTGCTCTCCAGATGGGCGACACCTTGCCATGATGCCCCACCCAGAAAGGTGTACATTACTTTGGCAGTGGCCTTGGATGCCTTTAGATTGGAAAAACTCTATCAAGGCATCACCTTGGttaaaaatgtttcaaaatgcCTACAAATGGTGCATAGAGACTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O15067	Phosphoribosylformylglycinamidine synthase OS=Homo sapiens OX=9606 GN=PFAS PE=1 SV=4
Q5SUR0	Phosphoribosylformylglycinamidine synthase OS=Mus musculus OX=10090 GN=Pfas PE=1 SV=1
Q9M8D3	Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g74260 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004535 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02769 all species →	AIRS_C	AIR synthase related protein, C-terminal domain	Domain	Interproscan
PF13507 all species →	GATase_5	CobB/CobQ-like glutamine amidotransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036921 all species →	Homologous_superfamily	PurM-like, N-terminal domain superfamily	Interproscan
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR036676 all species →	Homologous_superfamily	PurM-like, C-terminal domain superfamily	Interproscan
IPR010918 all species →	Domain	PurM-like, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10099 all species →	PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE	Interproscan

Gene Ontology

No Gene Ontology signature was detected for g7054.t1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01952	PFAS, purL; phosphoribosylformylglycinamidine synthase	EC:6.3.5.3	Purine metabolism	ko00230	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.