Detailed information of g71.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: OGG95272.1, hypothetical protein A2527_08870 [Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_50_16]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q748F5Flagellar P-ring protein OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=flgI PE=3 SV=1
A5G8X8Flagellar P-ring protein OS=Geotalea uraniireducens (strain Rf4) OX=351605 GN=flgI PE=3 SV=1
Q39YJ7Flagellar P-ring protein OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=flgI PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00107ADH_zinc_NZinc-binding dehydrogenaseDomainInterproscan
PF00109ketoacyl-syntBeta-ketoacyl synthase, N-terminal domainDomainInterproscan
PF02801Ketoacyl-synt_CBeta-ketoacyl synthase, C-terminal domainDomainInterproscan
PF02119FlgIFlagellar P-ring proteinFamilyInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF07426Dynactin_p22Dynactin subunit p22FamilyInterproscan
PF11629Mst1_SARAHC terminal SARAH domain of Mst1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR052993FamilyCilia- and flagella-associated protein 57Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR011048Homologous_superfamilyCytochrome cd1-nitrite reductase-like, haem d1 domain superfamilyInterproscan
IPR013149DomainAlcohol dehydrogenase-like, C-terminalInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR051603FamilyZinc-Containing ADH Family: Quinone Oxidoreductase/CCCRInterproscan
IPR014030DomainBeta-ketoacyl synthase, N-terminalInterproscan
IPR000794FamilyBeta-ketoacyl synthaseInterproscan
IPR016039Homologous_superfamilyThiolase-likeInterproscan
IPR014031DomainBeta-ketoacyl synthase, C-terminalInterproscan
IPR020841DomainPolyketide synthase, beta-ketoacyl synthase domainInterproscan
IPR018201Active_siteBeta-ketoacyl synthase, active siteInterproscan
IPR001782FamilyFlagellar P-ring proteinInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR004083FamilyRegulatory associated protein of TORInterproscan
IPR009991FamilyDynactin subunit 3Interproscan
IPR024205DomainMst1/2 SARAH domainInterproscan
IPR036674Homologous_superfamilyp53-like tetramerisation domain superfamilyInterproscan
IPR011524DomainSARAH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32215CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 57Interproscan
PTHR44154QUINONE OXIDOREDUCTASEInterproscan
PTHR11712POLYKETIDE SYNTHASE-RELATEDInterproscan
PTHR30381FLAGELLAR P-RING PERIPLASMIC PROTEIN FLGIInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR12848REGULATORY-ASSOCIATED PROTEIN OF MTORInterproscan
PTHR28360DYNACTIN SUBUNIT 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0003960Molecular FunctionNADPH:quinone reductase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0070402Molecular FunctionNADPH bindingInterproscan
GO:0004315Molecular Function3-oxoacyl-[acyl-carrier-protein] synthase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006633Biological Processfatty acid biosynthetic processInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0009428Cellular Componentbacterial-type flagellum basal body, distal rod, P ringInterproscan
GO:0030288Cellular Componentouter membrane-bounded periplasmic spaceInterproscan
GO:0071973Biological Processbacterial-type flagellum-dependent cell motilityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009267Biological Processcellular response to starvationInterproscan
GO:0010506Biological Processregulation of autophagyInterproscan
GO:0030307Biological Processpositive regulation of cell growthInterproscan
GO:0030674Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0031929Biological ProcessTOR signalingInterproscan
GO:0031931Cellular ComponentTORC1 complexInterproscan
GO:0038202Biological ProcessTORC1 signalingInterproscan
GO:0071230Biological Processcellular response to amino acid stimulusInterproscan
GO:0071902Biological Processpositive regulation of protein serine/threonine kinase activityInterproscan
GO:0005869Cellular Componentdynactin complexInterproscan
GO:0061640Biological Processcytoskeleton-dependent cytokinesisInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0051262Biological Processprotein tetramerizationInterproscan
GO:0007165Biological Processsignal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12593MPHOSPH6, MPP6; M-phase phosphoprotein 6, animal type-Bacterial motility proteinsko02035deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Lipid biosynthesis proteinsko01004deepkoala
Messenger RNA biogenesisko03019deepkoala

TOP