Detailed information of g712.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_041352996.1, RNA-binding protein 34-like [Gigantopelta aegis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P42696RNA-binding protein 34 OS=Homo sapiens OX=9606 GN=RBM34 PE=1 SV=2
Q5M9F1RNA-binding protein 34 OS=Rattus norvegicus OX=10116 GN=Rbm34 PE=1 SV=1
Q8C5L7RNA-binding protein 34 OS=Mus musculus OX=10090 GN=Rbm34 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyTHAP
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00067p450Cytochrome P450DomainInterproscan
PF13613HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF13621Cupin_8Cupin-like domainDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF12017Tnp_P_elementTransposable element P transposase-like, HTH domainDomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan
PF21789TNP-like_RNaseH_CTNP-like, RNase H C-terminal domainDomainInterproscan
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF20412RALGAPB_NRALGAPB N-terminal domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR050182FamilyCytochrome P450 family 2Interproscan
IPR001128FamilyCytochrome P450Interproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR038441Homologous_superfamilyTHAP-type zinc finger superfamilyInterproscan
IPR027805DomainTransposase, Helix-turn-helix domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR003347DomainJmjC domainInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR050910FamilyJMJD6 family arginine demethylases/lysyl-hydroxylasesInterproscan
IPR041667DomainCupin-like domain 8Interproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR021896DomainTHAP9-like, helix-turn-helix domainInterproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR048367DomainTransposable element P transposase-like, RNase H, C-terminal domainInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR046859DomainRal GTPase-activating protein subunit alpha/beta, N-terminal domainInterproscan
IPR027107FamilyTuberin/Ral GTPase-activating protein subunit alphaInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR034221DomainRBM34, RNA recognition motif 2Interproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR051547FamilyTyrosyl-DNA phosphodiesterase 2-likeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR053320FamilyProtein DD3-3 O-glycosylationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24300CYTOCHROME P450 508A4-RELATEDInterproscan
PTHR23080THAP DOMAIN PROTEINInterproscan
PTHR12480ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJDInterproscan
PTHR47611HAT DIMERISATION DOMAIN, C-TERMINALInterproscan
PTHR47577THAP DOMAIN-CONTAINING PROTEIN 6Interproscan
PTHR10063TUBERINInterproscan
PTHR23236EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4HInterproscan
PTHR15822TRAF AND TNF RECEPTOR-ASSOCIATED PROTEINInterproscan
PTHR35170PROTEIN DD3-3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006082Biological Processorganic acid metabolic processInterproscan
GO:0006805Biological Processxenobiotic metabolic processInterproscan
GO:0016712Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygenInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016706Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan
GO:0018126Biological Processprotein hydroxylationInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0045905Biological Processpositive regulation of translational terminationInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0016605Cellular ComponentPML bodyInterproscan
GO:0070260Molecular Function5'-tyrosyl-DNA phosphodiesterase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23209THAP9; DNA transposase THAP9EC:2.7.7.-
Ribosome biogenesisko03009deepkoala
Chromosome and associated proteinsko03036deepkoala

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