Gene detail

Detailed information of g7131.t1 in Tripedalia maipoensis

Genomic Location: scaffold_3:49467397...49480599
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12328 all species →	Rpp20	Rpp20 subunit of nuclear RNase MRP and P	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036882 all species →	Homologous_superfamily	Alba-like domain superfamily	Interproscan
IPR014612 all species →	Family	Ribonucleases P/MRP protein subunit Rpp20/Pop7	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15314 all species →	RIBONUCLEASE P PROTEIN SUBUNIT P20	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0000172 all species →	Cellular Component	ribonuclease MRP complex	Interproscan
GO:0001682 all species →	Biological Process	tRNA 5'-leader removal	Interproscan
GO:0005655 all species →	Cellular Component	nucleolar ribonuclease P complex	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0008033 all species →	Biological Process	tRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14527	RPP20, POP7; ribonuclease P/MRP protein subunit RPP20	EC:3.1.26.5	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.