Detailed information of g714.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_001634070.2, isochorismatase domain-containing protein 2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B5X0W9Isochorismatase domain-containing protein 1 OS=Salmo salar OX=8030 GN=isoc1 PE=2 SV=1
Q5PQA5Isochorismatase domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=isoc1 PE=2 SV=1
Q0IHU5Isochorismatase domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=isoc1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09398FOP_dimerFOP N terminal dimerisation domainDomainInterproscan
PF10233Cg6151-PUncharacterized conserved protein CG6151-PDomainInterproscan
PF00857IsochorismataseIsochorismatase familyFamilyInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF14933CEP19CEP19-like proteinFamilyInterproscan
PF03792PBCPBC domainFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF00664ABC_membraneABC transporter transmembrane regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018993DomainFGFR1 oncogene partner (FOP), N-terminal dimerisation domainInterproscan
IPR019365FamilyTVP18/Calcium channel flowerInterproscan
IPR036380Homologous_superfamilyIsochorismatase-like superfamilyInterproscan
IPR050993FamilyIsochorismatase domain-containing proteinInterproscan
IPR000868DomainIsochorismatase-likeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR045221FamilySphingomyelin synthase-likeInterproscan
IPR029412FamilyCentrosomal protein of 19kDaInterproscan
IPR005542DomainPBX, PBC domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR039421FamilyType 1 protein exporterInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10150DNA REPAIR ENDONUCLEASE XPFInterproscan
PTHR15431FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEINInterproscan
PTHR13314UNCHARACTERIZEDInterproscan
PTHR14119HYDROLASEInterproscan
PTHR21290SPHINGOMYELIN SYNTHETASEInterproscan
PTHR31539CENTROSOMAL PROTEIN OF 19K CEP19Interproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR43394ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000014Molecular Functionsingle-stranded DNA endodeoxyribonuclease activityInterproscan
GO:0000110Cellular Componentnucleotide-excision repair factor 1 complexInterproscan
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006296Biological Processobsolete nucleotide-excision repair, DNA incision, 5'-to lesionInterproscan
GO:1901255Biological Processnucleotide-excision repair involved in interstrand cross-link repairInterproscan
GO:0005815Cellular Componentmicrotubule organizing centerInterproscan
GO:0034453Biological Processmicrotubule anchoringInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0016780Molecular Functionphosphotransferase activity, for other substituted phosphate groupsInterproscan
GO:0030173Cellular Componentobsolete integral component of Golgi membraneInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0033188Molecular Functionsphingomyelin synthase activityInterproscan
GO:0046513Biological Processceramide biosynthetic processInterproscan
GO:0047493Molecular Functionceramide cholinephosphotransferase activityInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0034454Biological Processmicrotubule anchoring at centrosomeInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0097712Biological Processvesicle targeting, trans-Golgi to periciliary membrane compartmentInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0015421Molecular FunctionABC-type oligopeptide transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03134TAF10; transcription initiation factor TFIID subunit 10-CD moleculesko04090deepkoala
Chromosome and associated proteinsko03036deepkoala

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