Detailed information of g719.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_054286269.1, COP9 signalosome complex subunit 3-like [Macrosteles quadrilineatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A6H7B5COP9 signalosome complex subunit 3 OS=Bos taurus OX=9913 GN=COPS3 PE=2 SV=1
Q6P2U9COP9 signalosome complex subunit 3 OS=Danio rerio OX=7955 GN=cops3 PE=2 SV=1
Q9UNS2COP9 signalosome complex subunit 3 OS=Homo sapiens OX=9606 GN=COPS3 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08357SEFIRSEFIR domainFamilyInterproscan
PF02218HS1_repRepeat in HS1/CortactinRepeatInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF18097Vta1_CVta1 C-terminal domainDomainInterproscan
PF04652Vta1Vta1 likeFamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00856SETSET domainFamilyInterproscan
PF01399PCIPCI domainDomainInterproscan
PF00136DNA_pol_BDNA polymerase family BFamilyInterproscan
PF05600CDK5RAP3CDK5 regulatory subunit-associated protein 3FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013568DomainSEFIR domainInterproscan
IPR003134RepeatHs1/CortactinInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR041212DomainVta1, C-terminalInterproscan
IPR044538FamilyVacuolar protein sorting-associated protein Vta1-likeInterproscan
IPR039431DomainVta1/callose synthase, N-terminalInterproscan
IPR023175Homologous_superfamilyVta1/Callose synthase, N-terminal domain superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR001214DomainSET domainInterproscan
IPR036464Homologous_superfamilyRubisco LSMT, substrate-binding domain superfamilyInterproscan
IPR050600FamilySETD3/SETD6 methyltransferaseInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR044430DomainSETD6, SET domainInterproscan
IPR000717DomainProteasome component (PCI) domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR050756FamilyCOP9 signalosome complex subunit 3Interproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR042087Homologous_superfamilyDNA polymerase family B, thumb domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR017964Conserved_siteDNA-directed DNA polymerase, family B, conserved siteInterproscan
IPR006172FamilyDNA-directed DNA polymerase, family BInterproscan
IPR045846DomainDNA polymerase alpha catalytic subunit, catalytic domainInterproscan
IPR006134DomainDNA-directed DNA polymerase, family B, multifunctional domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008491FamilyCDK5 regulatory subunit-associated protein 3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10829CORTACTIN AND DREBRINInterproscan
PTHR46009VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOGInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR13271UNCHARACTERIZED PUTATIVE METHYLTRANSFERASEInterproscan
PTHR1075826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3Interproscan
PTHR45861DNA POLYMERASE ALPHA CATALYTIC SUBUNITInterproscan
PTHR14894CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005884Cellular Componentactin filamentInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030427Cellular Componentsite of polarized growthInterproscan
GO:0030833Biological Processregulation of actin filament polymerizationInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005771Cellular Componentmultivesicular bodyInterproscan
GO:0032511Biological Processlate endosome to vacuole transport via multivesicular body sorting pathwayInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0016279Molecular Functionprotein-lysine N-methyltransferase activityInterproscan
GO:0018026Biological Processpeptidyl-lysine monomethylationInterproscan
GO:0018022Biological Processpeptidyl-lysine methylationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008180Cellular ComponentCOP9 signalosomeInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0003688Molecular FunctionDNA replication origin bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0005658Cellular Componentalpha DNA polymerase:primase complexInterproscan
GO:0006272Biological Processleading strand elongationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:1902975Biological Processmitotic DNA replication initiationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000079Biological Processregulation of cyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0007346Biological Processregulation of mitotic cell cycleInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06106CTTN, EMS1; cortactin-Membrane traffickingko04131deepkoala
Cytoskeleton proteinsko04812deepkoala

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