Detailed information of g721.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_052767194.1, synaptojanin-2-binding protein-like [Mya arenaria]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E7FDW2E3 ubiquitin-protein ligase PDZRN3-B OS=Danio rerio OX=7955 GN=pdzrn3b PE=1 SV=1
P68907E3 ubiquitin-protein ligase PDZRN3 OS=Rattus norvegicus OX=10116 GN=Pdzrn3 PE=1 SV=1
Q69ZS0E3 ubiquitin-protein ligase PDZRN3 OS=Mus musculus OX=10090 GN=Pdzrn3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787PXPX domainDomainInterproscan
PF02194PXAPXA domainFamilyInterproscan
PF04666Glyco_transf_54N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved regionFamilyInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00266Aminotran_5Aminotransferase class-VDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF01227GTP_cyclohydroIGTP cyclohydrolase IDomainInterproscan
PF13476AAA_23AAA domainDomainInterproscan
PF17949PNDFANCM pseudonuclease domainDomainInterproscan
PF12826HHH_2Helix-hairpin-helix motifMotifInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF02187GAS2Growth-Arrest-Specific Protein 2 DomainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR001683DomainPhox homologyInterproscan
IPR003114DomainPhox-associated domainInterproscan
IPR006759FamilyGlycosyl transferase family 54Interproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR000192DomainAminotransferase class V domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR051342FamilyPDZ domain-containing scaffold proteinInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR017164FamilyWee1-like protein kinaseInterproscan
IPR050339FamilyCell Cycle and Stress Response KinaseInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR018234Conserved_siteGTP cyclohydrolase I, conserved siteInterproscan
IPR043133Homologous_superfamilyGTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductaseInterproscan
IPR001474FamilyGTP cyclohydrolase IInterproscan
IPR043134Homologous_superfamilyGTP cyclohydrolase I, N-terminal domainInterproscan
IPR020602DomainGTP cyclohydrolase I domainInterproscan
IPR038729DomainRad50/SbcC-type AAA domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026985FamilyFanconi anemia-associated protein of 24kDaInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR040646DomainFanconi anemia core complex-associated protein 24, pseudonuclease domainInterproscan
IPR041663DomainDisA/LigA, helix-hairpin-helix motifInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR036534Homologous_superfamilyGAR domain superfamilyInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR003108DomainGAR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22775SORTING NEXINInterproscan
PTHR12062N-ACETYLGLUCOSAMINYLTRANSFERASE VIInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR43092L-CYSTEINE DESULFHYDRASEInterproscan
PTHR19964MULTIPLE PDZ DOMAIN PROTEINInterproscan
PTHR11042EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATEDInterproscan
PTHR11109GTP CYCLOHYDROLASE IInterproscan
PTHR18867RAD50Interproscan
PTHR31786FANCONI ANEMIA CORE COMPLEX-ASSOCIATED PROTEIN 24Interproscan
PTHR46756TRANSGELINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0008375Molecular Functionacetylglucosaminyltransferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0004715Molecular Functionnon-membrane spanning protein tyrosine kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0004713Molecular Functionprotein tyrosine kinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0110031Biological Processnegative regulation of G2/MI transition of meiotic cell cycleInterproscan
GO:0003934Molecular FunctionGTP cyclohydrolase I activityInterproscan
GO:0046654Biological Processtetrahydrofolate biosynthetic processInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006729Biological Processtetrahydrobiopterin biosynthetic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000722Biological Processtelomere maintenance via recombinationInterproscan
GO:0000794Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003691Molecular Functiondouble-stranded telomeric DNA bindingInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0043047Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051880Molecular FunctionG-quadruplex DNA bindingInterproscan
GO:0070192Biological Processchromosome organization involved in meiotic cell cycleInterproscan
GO:0090305Biological Processobsolete nucleic acid phosphodiester bond hydrolysisInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0036297Biological Processinterstrand cross-link repairInterproscan
GO:0043240Cellular ComponentFanconi anaemia nuclear complexInterproscan
GO:0001578Biological Processmicrotubule bundle formationInterproscan
GO:0001725Cellular Componentstress fiberInterproscan
GO:0005884Cellular Componentactin filamentInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0008093Molecular Functioncytoskeletal anchor activityInterproscan
GO:0031110Biological Processregulation of microtubule polymerization or depolymerizationInterproscan
GO:0035371Cellular Componentmicrotubule plus-endInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0051764Biological Processactin crosslink formationInterproscan
GO:1904825Biological Processprotein localization to microtubule plus-endInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01495GCH1, folE; GTP cyclohydrolase IAEC:3.5.4.16
DNA repair and recombination proteinsko03400deepkoala
Folate biosynthesisko00790deepkoala

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