Detailed information of g723.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_031554587.1, calmodulin-A-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q40302Calmodulin OS=Macrocystis pyrifera OX=35122 PE=2 SV=3
P02597Calmodulin, striated muscle OS=Gallus gallus OX=9031 GN=CCM1 PE=3 SV=2
P04464Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04592SelP_NSelenoprotein P, N terminal regionFamilyInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF13609Porin_4Gram-negative porinDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF05794Tcp11T-complex protein 11FamilyInterproscan
PF04057Rep-A_NReplication factor-A protein 1, N-terminal domainDomainInterproscan
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF16900REPA_OB_2Replication protein A OB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR037941FamilySelenoprotein PInterproscan
IPR007671DomainSelenoprotein P, N-terminalInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR050230FamilyCalcium-Regulated Muscle Contraction and Cellular ProcessInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR023614Homologous_superfamilyPorin domain superfamilyInterproscan
IPR033900DomainPorin domain, Gram-negative typeInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR008862FamilyT-complex 11Interproscan
IPR004591FamilyReplication factor A protein 1Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR007199DomainReplication factor-A protein 1, N-terminalInterproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR031657DomainReplication protein A, OB domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10105SELENOPROTEIN PInterproscan
PTHR23048MYOSIN LIGHT CHAIN 1, 3Interproscan
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR12832TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11Interproscan
PTHR23273REPLICATION FACTOR A 1, RFA1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001887Biological Processselenium compound metabolic processInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0008430Molecular Functionselenium bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016460Cellular Componentmyosin II complexInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0015288Molecular Functionporin activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0005662Cellular ComponentDNA replication factor A complexInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0043047Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051321Biological Processmeiotic cell cycleInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25628TCP11; T-complex protein 11-Ubiquitin systemko04121deepkoala
Cilium and associated proteinsko03037deepkoala

TOP