Detailed information of g729.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_033112378.1, uncharacterized protein LOC117113199 [Anneissia japonica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P34897Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens OX=9606 GN=SHMT2 PE=1 SV=3
P14519Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus OX=9986 GN=SHMT2 PE=1 SV=2
Q9CZN7Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14580LRR_9Leucine-rich repeatRepeatInterproscan
PF01504PIP5KPhosphatidylinositol-4-phosphate 5-KinaseFamilyInterproscan
PF13472Lipase_GDSL_2GDSL-like Lipase/Acylhydrolase familyDomainInterproscan
PF13975gag-asp_proteasgag-polyprotein putative aspartyl proteaseDomainInterproscan
PF01284MARVELMembrane-associating domainDomainInterproscan
PF00464SHMTSerine hydroxymethyltransferaseDomainInterproscan
PF00909Ammonium_transpAmmonium Transporter FamilyFamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan
PF01217Clat_adaptor_sClathrin adaptor complex small chainDomainInterproscan
PF00928Adap_comp_subAdaptor complexes medium subunit familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR002498DomainPhosphatidylinositol-4-phosphate 4/5-kinase, coreInterproscan
IPR027483Homologous_superfamilyPhosphatidylinositol-4-phosphate 4/5-kinase, C-terminal domain superfamilyInterproscan
IPR023610FamilyPhosphatidylinositol-4/5-phosphate 5/4-kinaseInterproscan
IPR036514Homologous_superfamilySGNH hydrolase superfamilyInterproscan
IPR051532FamilyDiverse Ester Hydrolysis EnzymesInterproscan
IPR013830DomainSGNH hydrolase-type esterase domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR053134FamilyRNA-directed DNA polymerase homologInterproscan
IPR001285FamilySynaptophysin/synaptoporinInterproscan
IPR008253DomainMarvel domainInterproscan
IPR001085FamilySerine hydroxymethyltransferaseInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR049943FamilySerine hydroxymethyltransferase-likeInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR039429DomainSerine hydroxymethyltransferase-like domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR029020Homologous_superfamilyAmmonium/urea transporterInterproscan
IPR024041DomainAmmonium transporter AmtB-like domainInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR036168Homologous_superfamilyAP-2 complex subunit mu, C-terminal superfamilyInterproscan
IPR022775DomainAP complex, mu/sigma subunitInterproscan
IPR027059FamilyCoatomer delta subunitInterproscan
IPR028565DomainMu homology domainInterproscan
IPR011012Homologous_superfamilyLongin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15454NISCHARIN RELATEDInterproscan
PTHR23086PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASEInterproscan
PTHR30383THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1Interproscan
PTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINInterproscan
PTHR10306SYNAPTOPHYSINInterproscan
PTHR11680SERINE HYDROXYMETHYLTRANSFERASEInterproscan
PTHR11730AMMONIUM TRANSPORTERInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR10121COATOMER SUBUNIT DELTAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0046488Biological Processphosphatidylinositol metabolic processInterproscan
GO:0052742Molecular Functionphosphatidylinositol kinase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016308Molecular Function1-phosphatidylinositol-4-phosphate 5-kinase activityInterproscan
GO:0046854Biological Processphosphatidylinositol phosphate biosynthetic processInterproscan
GO:0004622Molecular Functionlysophospholipase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0008021Cellular Componentsynaptic vesicleInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004372Molecular Functionglycine hydroxymethyltransferase activityInterproscan
GO:0019264Biological Processglycine biosynthetic process from serineInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0035999Biological Processtetrahydrofolate interconversionInterproscan
GO:0002082Biological Processregulation of oxidative phosphorylationInterproscan
GO:0005743Cellular Componentmitochondrial inner membraneInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006730Biological Processone-carbon metabolic processInterproscan
GO:0046653Biological Processtetrahydrofolate metabolic processInterproscan
GO:0046655Biological Processfolic acid metabolic processInterproscan
GO:0050897Molecular Functioncobalt ion bindingInterproscan
GO:0070552Cellular ComponentBRISC complexInterproscan
GO:0070905Molecular Functionserine bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0008519Molecular Functionammonium channel activityInterproscan
GO:0072488Biological Processammonium transmembrane transportInterproscan
GO:0097272Biological Processammonium homeostasisInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0030126Cellular ComponentCOPI vesicle coatInterproscan
GO:0051645Biological ProcessGolgi localizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20471COPD, ARCN1, RET2; coatomer subunit delta-Antifolate resistanceko01523deepkoala
Ether lipid metabolismko00565deepkoala
Transportersko02000deepkoala
Membrane traffickingko04131deepkoala

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