Genomic Location: scaffold_1:38076640...38091377
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families
| CDS |
| g732.t1 |
| Transcript |
| g732.t1 |
| Protein |
| g732.t1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | E3|E3 activity RING|U-box · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11789 all species → | zf-Nse | Zinc-finger of the MIZ type in Nse subunit | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR004181 all species → | Domain | Zinc finger, MIZ-type | Interproscan |
| IPR026846 all species → | Family | E3 SUMO-protein ligase Nse2 (Mms21) | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21330 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0000724 all species → | Biological Process | double-strand break repair via homologous recombination | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0016925 all species → | Biological Process | protein sumoylation | Interproscan |
| GO:0019789 all species → | Molecular Function | SUMO transferase activity | Interproscan |
| GO:0030915 all species → | Cellular Component | Smc5-Smc6 complex | Interproscan |
| GO:0061665 all species → | Molecular Function | SUMO ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K22756 | NSMCE2, NSE2; E3 SUMO-protein ligase NSE2 | EC:2.3.2.- | DNA repair and recombination proteins | ko03400 | deepkoala |
