Detailed information of g734.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3122679.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O35245Polycystin-2 OS=Mus musculus OX=10090 GN=Pkd2 PE=1 SV=2
Q13563Polycystin-2 OS=Homo sapiens OX=9606 GN=PKD2 PE=1 SV=3
Q4GZT3Polycystin-2 OS=Bos taurus OX=9913 GN=PKD2 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08159NUC153NUC153 domainDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF06839zf-GRFGRF zinc fingerDomainInterproscan
PF08265YL1_CYL1 nuclear protein C-terminal domainDomainInterproscan
PF05764YL1YL1 nuclear proteinFamilyInterproscan
PF07719TPR_2Tetratricopeptide repeatRepeatInterproscan
PF00149MetallophosCalcineurin-like phosphoesteraseDomainInterproscan
PF08321PPP5PPP5 TPR repeat regionRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR040382FamilyNucleolar protein 10/Enp2Interproscan
IPR012580DomainNUC153Interproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR024862FamilyTransient receptor potential cation channel subfamily VInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR047887DomainARHGAP20, PH domainInterproscan
IPR039846FamilyZinc finger CCHC domain-containing protein 4Interproscan
IPR010666DomainZinc finger, GRF-typeInterproscan
IPR013272DomainVps72/YL1, C-terminalInterproscan
IPR046757DomainVps72/YL1, N-terminalInterproscan
IPR008895FamilyVps72/YL1 familyInterproscan
IPR029052Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR013105RepeatTetratricopeptide repeat 2Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR004843DomainCalcineurin-like phosphoesterase domain, ApaH typeInterproscan
IPR006186DomainSerine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphataseInterproscan
IPR013235DomainPPP domainInterproscan
IPR051134FamilyProtein Phosphatase PPPInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14927UNCHARACTERIZEDInterproscan
PTHR10582TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINInterproscan
PTHR23179T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATEDInterproscan
PTHR13493ZINC FINGER CCHC DOMAIN-CONTAININGInterproscan
PTHR13275YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1Interproscan
PTHR45668SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008988Molecular FunctionrRNA (adenine-N6-)-methyltransferase activityInterproscan
GO:0031167Biological ProcessrRNA methylationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043486Biological Processobsolete histone exchangeInterproscan
GO:0045815Biological Processtranscription initiation-coupled chromatin remodelingInterproscan
GO:0140849Molecular FunctionATP-dependent H2AZ histone chaperone activityInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14788NOL10, ENP2; ribosome biogenesis protein ENP2-Chromosome and associated proteinsko03036deepkoala
Ribosome biogenesisko03009deepkoala

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