Detailed information of g7362.t1 in Montipora capitata

Genomic Location: Sc0000168:156257...157322
NR annotation: CAH3143940.1, unnamed protein product [Porites evermanni]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JIB4General transcription factor IIH subunit 2 OS=Mus musculus OX=10090 GN=Gtf2h2 PE=1 SV=1
A0JN27General transcription factor IIH subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2h2 PE=1 SV=1
Q2TBV5General transcription factor IIH subunit 2 OS=Bos taurus OX=9913 GN=GTF2H2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006027 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07975
all species →		C1_4TFIIH C1-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR004595
all species →		DomainTFIIH C1-like domainInterproscan
IPR046349
all species →		Homologous_superfamilyC1-like domain superfamilyInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR012170
all species →		FamilyTFIIH subunit Ssl1/p44Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12695
all species →		GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005675
all species →		Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0000439
all species →		Cellular Componenttranscription factor TFIIH core complexInterproscan
GO:0006351
all species →		Biological ProcessDNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g7362.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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