Gene detail

Detailed information of g7364.t1.1 in Haliclystus octoradiatus

Genomic Location: not available for this species
NR annotation: RMX44226.1, hypothetical protein pdam_00005277 [Pocillopora damicornis]
Species abbreviation HOCTO · all data for this species · gene families

Sequence

CDS

g7364.t1

ATGGCTATTGAAATGGTAGATCAAACATACATTATGAGTACAAATTTCAATAACGATGAATCTGTAGCTACCAATGGCTATACAAAGTTTGAAATTAGCCAGGATGCTTCTCAAATTCTTGAAGATACAATGAGTAGTGGAATTCATGGTTATATTACTACAGATGGGAATTTGAATGCTGTTATAGCAAAACTAGATCACAAAACTCATCAAATTAAGGCTCAAATCTATGAAATTATCATTGATCAGTATGTTGAATTTAGAAAAGCGCATATGGATTACTCACATttgaatgaaaaattaaattcgTTACACAATGAAATTGATGTATTTGTTACTAAATACAATgATGAAATTGAGCCATCTGCCAAGCAAAGTATTGAAGAACACAATGAAGCAACTAAAGATTTTAATAAAAGTGAAAAAGATGTTCAAATGTTAAAACAAATCTTAACGATTCACGAGCAATTGGCTGCATGCTCGCAAAGTTTACGTTCTCATCATAAATATGTTGAAGCAGCAGTCTCAATTCAAAAAGTTagaaatattttagaaagCATACCTCAAGATTTATGCGAAACTTCAGTGTTTGAAGCACTAATGGagaaatatcaaattttgaaagcaACGCTTATGGCATCAATAGAAAAAATATGGTGGAAAATCATTAAATGGGAACACCAAAAACCGCCATCGTGGGATCGTGCTGATAGTCATTTGGCGACAAAACTTATAATTGCAATTAATGGCGAAGAAGGATATTCATTGCAGTCGGCTGTGTCTGCATTTCACGAATTGGACTGTCTAGATGGATATCTAAAGGTGTTTGCAAAGAAGATTTGTTCATACTTCATGAAAACAGCAATTGTCTTTCCAAACCTAACAGTTACAAAAGAGTCAAATTCAAAGATACCAACACTTCGAATTATAAAAGATGAAACATACAAACCAAAACGGCCGCTTCGTGTCTCTCAAGTATATGAACGGCAAATGACTATTATAACATTCTTAACAACAAATTTAAAGTTAAAAGCCAAGAACCCTGAGGAAAACAATATATCAATCATTAATCGACTCgGATCATTGATATGGAAAGAGCTTTCAAAACTACTTATTAAAGAAACATTATCAGCAGCTATTCCAAAAACAAGCAGTCAGCTTCAAGAATTTGGTGATATTGTTAAAGTCACTGTTGATTTTGAGGCTGTTTTGAAAGAAGCAGGTTTTGCCCCAGAAGACTCAAATGAATTATCTACTTATgtgaaaaatatcaatgtcAATTTTACTAATAAAAAGTGTCAAGATGCATTGATTGAGGCAAGAGATCTAATGAAGTCAGACATTCATGAAGTTGTATTAATTGATGATCAGGAGGACAGAGCAACTGTTGCTCTTTCATTAACAAAGGGTGATAAACTAAGTGTGAGAGAACAAGCCTTGCTTGGTGCAAAGTTAATAATTGACGATGATATGCTTGGAGCAAAAACGTTTCATTTTCCACAATGTAGAATCAGTCTTGCAGCGAAGAATATCATGGATCTTGTCTATAAGACTCTTCTCGATGCAATCAATACCACGCCACCTGTTGCTTTACAGATGTATTACAGTGCAAGGAGCATATTAACACTATTTACTGAAGTTGTACCAATTTGTCATAAAGATAGTTTGaAACTACCTCAATTAGCTGCGTTATATTACAACAGCTGCATGTATTTAGCTCATCACTGTAACACACTTGGACATCAATTCAAACAAAGTTTTCCTGAACCATTGAATGAAAAAGTTTTAACTTTTGTTGATCTTGTTCCCATGTTAAGACGTTCTGGTACAAAATGCTTCACAGATATCCTGGTTTCAGAGAAAATCACACTCTGTGATATTGTTGGTCAATGTGGCTCATTTGTTGACGAAGAACCTGATATTCTGACCAAAGCCTTTAGTCAGATGCAACATCAATTTATTCGACTTAGTAAAGTATGGAAAGATGTATTACCAAGcaacatttatgaaatatcAATTGGCCGTCTCCTTGATTCGGTTATAAAAAGAATCATTGGAGAAATTTTGAAACTAGAGCATATCTCTGCTGACGAAGCAACACATTTCCATTTgttattcaattcaattattGACAGAGCATCTGATATGTTAGCCCCTGGTGCTTTCGTAGACtctaaaaaaaaaatcAGTGTATTAGTCCAAACGTTTGAACCAACAGAAATGAGAATACTTGTGAAggcattatttcaaaacacagATCGAAGAGCAAATGTTTTAGCTACAATGAGAAGATAA

Transcript

g7364.t1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4V8C2	Centromere/kinetochore protein zw10 homolog OS=Rattus norvegicus OX=10116 GN=Zw10 PE=2 SV=3
O43264	Centromere/kinetochore protein zw10 homolog OS=Homo sapiens OX=9606 GN=ZW10 PE=1 SV=3
Q5RFM4	Centromere/kinetochore protein zw10 homolog OS=Pongo abelii OX=9601 GN=ZW10 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005484 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20665 all species →	Zw10_middle	Centromere/kinetochore protein zw10, middle domain	Repeat	Interproscan
PF20666 all species →	ZW10_C	Centromere/kinetochore protein zw10, C-terminal	Repeat	Interproscan
PF06248 all species →	Zw10_N	Centromere/kinetochore Zw10 N-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048344 all species →	Domain	Centromere/kinetochore protein zw10, middle domain	Interproscan
IPR048343 all species →	Domain	Centromere/kinetochore protein zw10, C-terminal domain	Interproscan
IPR046362 all species →	Homologous_superfamily	Zw10/DSL1, C-terminal	Interproscan
IPR009361 all species →	Domain	Centromere/kinetochore protein zw10, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12205 all species →	CENTROMERE/KINETOCHORE PROTEIN ZW10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000278 all species →	Biological Process	mitotic cell cycle	Interproscan
GO:0000775 all species →	Cellular Component	chromosome, centromeric region	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006888 all species →	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0007094 all species →	Biological Process	mitotic spindle assembly checkpoint signaling	Interproscan
GO:1990423 all species →	Cellular Component	RZZ complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g7364.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.