Detailed information of g738.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_048242945.1, hemicentin-1-like isoform X1 [Haliotis rufescens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
A2AJ76Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17039Glyco_tran_10_NFucosyltransferase, N-terminalDomainInterproscan
PF00852Glyco_transf_10Glycosyltransferase family 10 (fucosyltransferase) C-termFamilyInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan
PF00047igImmunoglobulin domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF09588YqaJYqaJ-like viral recombinase domainDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR031481DomainFucosyltransferase, N-terminalInterproscan
IPR038577Homologous_superfamilyGT10-like, C-terminal domain superfamilyInterproscan
IPR001503FamilyGlycosyl transferase family 10Interproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR013106DomainImmunoglobulin V-set domainInterproscan
IPR013151DomainImmunoglobulinInterproscan
IPR051275FamilyCellular adhesion and signaling domain-containing proteinInterproscan
IPR003006Conserved_siteImmunoglobulin/major histocompatibility complex, conserved siteInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR019080DomainYqaJ viral recombinaseInterproscan
IPR051703FamilyNF-kappa-B Signaling RegulatorInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR11929ALPHA- 1,3 -FUCOSYLTRANSFERASEInterproscan
PTHR35558SGNH_HYDRO DOMAIN-CONTAINING PROTEINInterproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR11640NEPHRINInterproscan
PTHR46609EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0008417Molecular Functionfucosyltransferase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0036065Biological ProcessfucosylationInterproscan
GO:0046920Molecular Functionalpha-(1->3)-fucosyltransferase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14464FUT-1, FucTC; alpha-1,3-fucosyltransferaseEC:2.4.1.-
Various types of N-glycan biosynthesisko00513deepkoala

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