Gene detail

Detailed information of g740.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_047132328.1, atlastin-2 [Hydra vulgaris]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PA06	Atlastin-2 OS=Mus musculus OX=10090 GN=Atl2 PE=1 SV=1
Q95LN3	Atlastin-2 OS=Macaca fascicularis OX=9541 GN=ATL2 PE=2 SV=1
Q8NHH9	Atlastin-2 OS=Homo sapiens OX=9606 GN=ATL2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000481 (this species only)
Orthogroup (gene family)	OG0000620 (this species only)
Orthogroup (gene family)	OG0001049 (this species only)
Orthogroup (gene family)	OG0004076 (this species only)
Orthogroup (gene family)	OG0004590 (this species only)
Orthogroup (gene family)	OG0008418 (this species only)
Orthogroup (gene family)	OG0015709 (this species only)
Orthogroup (gene family)	OG0017064 (this species only)
Orthogroup (gene family)	OG0170826 (this species only)
Orthogroup (gene family)	OG0171041 (this species only)
Orthogroup (gene family)	OG0171543 (this species only)
Orthogroup (gene family)	OG0172791 (this species only)
Orthogroup (gene family)	OG0173301 (this species only)
Orthogroup (gene family)	OG0174634 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02263 all species →	GBP	Guanylate-binding protein, N-terminal domain	Domain	Interproscan
PF02841 all species →	GBP_C	Guanylate-binding protein, C-terminal domain	Domain	Interproscan
PF03148 all species →	Tektin	Tektin family	Family	Interproscan
PF06602 all species →	Myotub-related	Myotubularin-like phosphatase domain	Domain	Interproscan
PF01757 all species →	Acyl_transf_3	Acyltransferase family	Family	Interproscan
PF20146 all species →	NRF	Nose resistant-to-fluoxetine protein, N-terminal domain	Domain	Interproscan
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR030386 all species →	Domain	GB1/RHD3-type guanine nucleotide-binding (G) domain	Interproscan
IPR036543 all species →	Homologous_superfamily	Guanylate-binding protein, C-terminal domain superfamily	Interproscan
IPR015894 all species →	Domain	Guanylate-binding protein, N-terminal	Interproscan
IPR003191 all species →	Domain	Guanylate-binding protein/Atlastin, C-terminal	Interproscan
IPR048256 all species →	Family	Tektin-like	Interproscan
IPR038949 all species →	Family	Tektin-like protein 1	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR010569 all species →	Domain	Myotubularin-like, phosphatase domain	Interproscan
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR030564 all species →	Family	Myotubularin family	Interproscan
IPR052728 all species →	Family	Oxygen and lipid transport regulator	Interproscan
IPR002656 all species →	Domain	Acyltransferase 3 domain	Interproscan
IPR006621 all species →	Domain	Nose resistant-to-fluoxetine protein, N-terminal	Interproscan
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan
IPR020846 all species →	Domain	Major facilitator superfamily domain	Interproscan
IPR051068 all species →	Family	Major Facilitator Superfamily Domain-Containing Protein	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR050757 all species →	Family	Collagen-modifying Glycosyltransferase 25	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10751 all species →	GUANYLATE BINDING PROTEIN	Interproscan
PTHR35081 all species →	COILED-COIL DOMAIN-CONTAINING PROTEIN 105	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR10807 all species →	MYOTUBULARIN-RELATED	Interproscan
PTHR11161 all species →	O-ACYLTRANSFERASE	Interproscan
PTHR23510 all species →	INNER MEMBRANE TRANSPORT PROTEIN YAJR	Interproscan
PTHR10730 all species →	PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0007029 all species →	Biological Process	endoplasmic reticulum organization	Interproscan
GO:0051260 all species →	Biological Process	protein homooligomerization	Interproscan
GO:0004438 all species →	Molecular Function	phosphatidylinositol-3-phosphate phosphatase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0010507 all species →	Biological Process	negative regulation of autophagy	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0046856 all species →	Biological Process	phosphatidylinositol dephosphorylation	Interproscan
GO:0016747 all species →	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0008475 all species →	Molecular Function	procollagen-lysine 5-dioxygenase activity	Interproscan
GO:0017185 all species →	Biological Process	peptidyl-lysine hydroxylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17339	ATL; atlastin	EC:3.6.5.-	Membrane trafficking	ko04131	deepkoala
K18084	MTMR9; myotubularin-related protein 9	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.