Detailed information of g742.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: RMX53720.1, hypothetical protein pdam_00000298 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q92804TATA-binding protein-associated factor 2N OS=Homo sapiens OX=9606 GN=TAF15 PE=1 SV=1
Q28009RNA-binding protein FUS OS=Bos taurus OX=9913 GN=FUS PE=2 SV=2
P56959RNA-binding protein FUS OS=Mus musculus OX=10090 GN=Fus PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13015PRKCSH_1Glucosidase II beta subunit-like proteinFamilyInterproscan
PF12999PRKCSH-likeGlucosidase II beta subunit-likeFamilyInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF01411tRNA-synt_2ctRNA synthetases class II (A)FamilyInterproscan
PF00641zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044865DomainMRH domainInterproscan
IPR039794FamilyGlucosidase II beta subunit-likeInterproscan
IPR036607DomainGlucosidase 2 subunit beta-likeInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR009011Homologous_superfamilyMannose-6-phosphate receptor binding domain superfamilyInterproscan
IPR028146DomainGlucosidase II beta subunit, N-terminalInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR017114FamilyC2H2-type Zinc finger protein, YY1-likeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR000569DomainHECT domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR002318FamilyAlanine-tRNA ligase, class IIcInterproscan
IPR018162Homologous_superfamilyAlanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilyInterproscan
IPR018164DomainAlanyl-tRNA synthetase, class IIc, N-terminalInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR018165DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan
IPR050058FamilyAlanine--tRNA ligaseInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR034870FamilyTAF15/EWS/TLS familyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan
PTHR12630N-LINKED OLIGOSACCHARIDE PROCESSINGInterproscan
PTHR14003TRANSCRIPTIONAL REPRESSOR PROTEIN YYInterproscan
PTHR45632LD33804PInterproscan
PTHR11777ALANYL-TRNA SYNTHETASEInterproscan
PTHR23238RNA BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006491Biological ProcessN-glycan processingInterproscan
GO:0017177Cellular Componentglucosidase II complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0031519Cellular ComponentPcG protein complexInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004813Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006419Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09201YY; transcription factor YY-Lectinsko04091deepkoala
Ribosome biogenesisko03009deepkoala
Mitochondrial biogenesisko03029deepkoala

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