Gene detail

Detailed information of g744.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_032222696.1, bromodomain-containing protein 8 isoform X6 [Nematostella vectensis]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H0E9	Bromodomain-containing protein 8 OS=Homo sapiens OX=9606 GN=BRD8 PE=1 SV=2
Q8R3B7	Bromodomain-containing protein 8 OS=Mus musculus OX=10090 GN=Brd8 PE=1 SV=2
O43422	52 kDa repressor of the inhibitor of the protein kinase OS=Homo sapiens OX=9606 GN=THAP12 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000033 (this species only)
Orthogroup (gene family)	OG0000051 (this species only)
Orthogroup (gene family)	OG0000095 (this species only)
Orthogroup (gene family)	OG0001379 (this species only)
Orthogroup (gene family)	OG0002902 (this species only)
Orthogroup (gene family)	OG0006867 (this species only)
Orthogroup (gene family)	OG0009893 (this species only)
Orthogroup (gene family)	OG0010620 (this species only)
Orthogroup (gene family)	OG0048365 (this species only)
Orthogroup (gene family)	OG0171080 (this species only)
Orthogroup (gene family)	OG0171534 (this species only)
Orthogroup (gene family)	OG0171760 (this species only)
Orthogroup (gene family)	OG0173191 (this species only)
Orthogroup (gene family)	OG0173948 (this species only)
Orthogroup (gene family)	OG0174509 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00118 all species →	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00439 all species →	Bromodomain	Bromodomain	Domain	Interproscan
PF21787 all species →	TNP-like_RNaseH_N	TNP-like, RNase H N-terminal domain	Domain	Interproscan
PF00588 all species →	SpoU_methylase	SpoU rRNA Methylase family	Family	Interproscan
PF08032 all species →	SpoU_sub_bind	RNA 2'-O ribose methyltransferase substrate binding	Domain	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan
PF12661 all species →	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF02494 all species →	HYR	HYR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028790 all species →	Family	Molecular chaperone MKKS	Interproscan
IPR027410 all species →	Homologous_superfamily	TCP-1-like chaperonin intermediate domain superfamily	Interproscan
IPR027413 all species →	Homologous_superfamily	GroEL-like equatorial domain superfamily	Interproscan
IPR027409 all species →	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR002423 all species →	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR052958 all species →	Family	Interferon-induced PKR regulator	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR014014 all species →	Domain	RNA helicase, DEAD-box type, Q motif	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR000629 all species →	Conserved_site	ATP-dependent RNA helicase DEAD-box, conserved site	Interproscan
IPR001487 all species →	Domain	Bromodomain	Interproscan
IPR036427 all species →	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR048365 all species →	Domain	Transposable element P transposase-like, RNase H domain, N-terminal	Interproscan
IPR029026 all species →	Homologous_superfamily	tRNA (guanine-N1-)-methyltransferase, N-terminal	Interproscan
IPR047182 all species →	Family	rRNA methyltransferase 1, mitochondrial	Interproscan
IPR013123 all species →	Domain	RNA 2-O ribose methyltransferase, substrate binding	Interproscan
IPR029064 all species →	Homologous_superfamily	Ribosomal protein eL30-like superfamily	Interproscan
IPR001537 all species →	Domain	tRNA/rRNA methyltransferase, SpoU type	Interproscan
IPR029028 all species →	Homologous_superfamily	Alpha/beta knot methyltransferases	Interproscan
IPR051998 all species →	Family	Meteorin-like	Interproscan
IPR008993 all species →	Homologous_superfamily	Tissue inhibitor of metalloproteinases-like, OB-fold	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR001759 all species →	Family	Pentraxin-related	Interproscan
IPR003410 all species →	Domain	HYR domain	Interproscan
IPR050906 all species →	Family	Notch signaling pathway	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR013032 all species →	Conserved_site	EGF-like, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46787 all species →	SYNDROMES PUTATIVE CHAPERONIN-RELATED	Interproscan
PTHR46289 all species →	52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED	Interproscan
PTHR47958 all species →	ATP-DEPENDENT RNA HELICASE DBP3	Interproscan
PTHR15398 all species →	BROMODOMAIN-CONTAINING PROTEIN 8	Interproscan
PTHR46103 all species →	RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL	Interproscan
PTHR28593 all species →	METEORIN-LIKE PROTEIN	Interproscan
PTHR24044 all species →	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0032502 all species →	Biological Process	developmental process	Interproscan
GO:0046907 all species →	Biological Process	intracellular transport	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0051131 all species →	Biological Process	chaperone-mediated protein complex assembly	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:1902636 all species →	Cellular Component	kinociliary basal body	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0003724 all species →	Molecular Function	RNA helicase activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:1990904 all species →	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016573 all species →	Biological Process	obsolete histone acetylation	Interproscan
GO:0035267 all species →	Cellular Component	NuA4 histone acetyltransferase complex	Interproscan
GO:0000154 all species →	Biological Process	rRNA modification	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0016435 all species →	Molecular Function	rRNA (guanine) methyltransferase activity	Interproscan
GO:0031167 all species →	Biological Process	rRNA methylation	Interproscan
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0008173 all species →	Molecular Function	RNA methyltransferase activity	Interproscan
GO:0005179 all species →	Molecular Function	hormone activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005112 all species →	Molecular Function	Notch binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g744.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.