Detailed information of g7453.t1 in Acropora digitifera

Genomic Location: chr3Alt:31212109...31219937
NR annotation: XP_029192054.2, glycine betaine transporter OpuD-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A0B5RUB0Trimethylamine transporter OS=Myroides profundi OX=480520 GN=tmaT PE=1 SV=1
P9WPR6Uncharacterized transporter MT0942 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT0942 PE=3 SV=1
P9WPR7Uncharacterized transporter Rv0917 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv0917 PE=3 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04749
all species →
PLAC8PLAC8 familyFamilyInterproscan
PF02028
all species →
BCCTBCCT, betaine/carnitine/choline family transporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000060
all species →
FamilyBCCT transporter familyInterproscan
IPR006461
all species →
FamilyPLAC8 motif-containing proteinInterproscan
IPR018093
all species →
Conserved_siteBCCT transporter, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30047
all species →
HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0022857
all species →
Molecular Functiontransmembrane transporter activityInterproscan
GO:0071705
all species →
Biological Processnitrogen compound transportInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0006810
all species →
Biological ProcesstransportInterproscan
GO:0016021
all species →
Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g7453.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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