Detailed information of g748.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_036424869.1, ubiquitin domain-containing protein 2-like [Colossoma macropomum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6DG43Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1
Q3ZBQ1Ubiquitin domain-containing protein 1 OS=Bos taurus OX=9913 GN=UBTD1 PE=2 SV=1
Q68FV8Ubiquitin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubtd1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16455UBDUbiquitin-binding domainDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF08221HTH_9RNA polymerase III subunit RPC82 helix-turn-helix domainDomainInterproscan
PF01237Oxysterol_BPOxysterol-binding protein FamilyInterproscan
PF00169PHPH domainDomainInterproscan
PF13271DUF4062Domain of unknown function (DUF4062)FamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF01513NAD_kinaseATP-NAD kinase N-terminal domainDomainInterproscan
PF20143NAD_kinase_CATP-NAD kinase C-terminal domainDomainInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF07522DRMBLDNA repair metallo-beta-lactamaseDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR038169Homologous_superfamilyDC-UbP/UBTD2, N-terminal domain superfamilyInterproscan
IPR032752DomainDC-UbP/UBTD2, N-terminal domainInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR039869FamilyUbiquitin domain-containing protein 1/2Interproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR039748FamilyDNA-directed RNA polymerase III subunit RPC3Interproscan
IPR013197DomainRNA polymerase III subunit RPC82-related, helix-turn-helixInterproscan
IPR050887FamilyBeta-mannosidase glycosyl hydrolasesInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000648FamilyOxysterol-binding proteinInterproscan
IPR037239Homologous_superfamilyOxysterol-binding protein superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR052752FamilyNACHT and WD repeat domain-containing proteinInterproscan
IPR025139DomainDomain of unknown function DUF4062Interproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR002504FamilyNAD kinaseInterproscan
IPR017438Homologous_superfamilyInorganic polyphosphate/ATP-NAD kinase, N-terminalInterproscan
IPR017437Homologous_superfamilyATP-NAD kinase, PpnK-type, C-terminalInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR016064Homologous_superfamilyNAD kinase/diacylglycerol kinase-like domain superfamilyInterproscan
IPR050930FamilyMajor Facilitator Superfamily Vesicular TransporterInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR011084DomainDNA repair metallo-beta-lactamaseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDInterproscan
PTHR12949RNA POLYMERASE III DNA DIRECTED -RELATEDInterproscan
PTHR43730BETA-MANNOSIDASEInterproscan
PTHR10972OXYSTEROL-BINDING PROTEIN-RELATEDInterproscan
PTHR19871BETA TRANSDUCIN-RELATED PROTEINInterproscan
PTHR20275NAD KINASEInterproscan
PTHR23506-Interproscan
PTHR48051-Interproscan
PTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0004567Molecular Functionbeta-mannosidase activityInterproscan
GO:0006516Biological Processglycoprotein catabolic processInterproscan
GO:0008289Molecular Functionlipid bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0015248Molecular Functionobsolete sterol transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0032934Molecular Functionsterol bindingInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0097038Cellular Componentperinuclear endoplasmic reticulumInterproscan
GO:0003951Molecular FunctionNAD+ kinase activityInterproscan
GO:0006741Biological ProcessNADP biosynthetic processInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0019674Biological ProcessNAD metabolic processInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0035312Molecular Function5'-3' DNA exonuclease activityInterproscan
GO:0036297Biological Processinterstrand cross-link repairInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20456OSBP; oxysterol-binding protein 1-Protein phosphatases and associated proteinsko01009deepkoala
Membrane traffickingko04131deepkoala

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