Detailed information of g749.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_036424869.1, ubiquitin domain-containing protein 2-like [Colossoma macropomum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6DG43Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1
Q3ZBQ1Ubiquitin domain-containing protein 1 OS=Bos taurus OX=9913 GN=UBTD1 PE=2 SV=1
Q68FV8Ubiquitin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubtd1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21485IF5A-like_NTranslation initiation factor 5A-like, N-terminalDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF01287eIF-5aEukaryotic elongation factor 5A hypusine, DNA-binding OB foldDomainInterproscan
PF00134Cyclin_NCyclin, N-terminal domainDomainInterproscan
PF12895ANAPC3Anaphase-promoting complex, cyclosome, subunit 3RepeatInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF04931DNA_pol_phiDNA polymerase phiFamilyInterproscan
PF16455UBDUbiquitin-binding domainDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF03474DMADMRTA motifDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048670DomainTranslation initiation factor 5A-like, N-terminalInterproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR001478DomainPDZ domainInterproscan
IPR019769PTMTranslation elongation factor, IF5A, hypusine siteInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR020189DomainTranslation elongation factor, IF5A C-terminalInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001884FamilyTranslation elongation factor IF5A-likeInterproscan
IPR008991Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR006671DomainCyclin, N-terminalInterproscan
IPR039361FamilyCyclinInterproscan
IPR036915Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR033351FamilyCentrosomal protein POC5Interproscan
IPR007015FamilyDNA polymerase V/Myb-binding protein 1AInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR038169Homologous_superfamilyDC-UbP/UBTD2, N-terminal domain superfamilyInterproscan
IPR032752DomainDC-UbP/UBTD2, N-terminal domainInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR039869FamilyUbiquitin domain-containing protein 1/2Interproscan
IPR005173DomainDMRTA motifInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR039808FamilyCadherinInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11673TRANSLATION INITIATION FACTOR 5A FAMILY MEMBERInterproscan
PTHR10177CYCLINSInterproscan
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan
PTHR28618CENTROSOMAL PROTEIN POC5Interproscan
PTHR13213MYB-BINDING PROTEIN 1A FAMILY MEMBERInterproscan
PTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24027CADHERIN-23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:0045901Biological Processpositive regulation of translational elongationInterproscan
GO:0045905Biological Processpositive regulation of translational terminationInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0000079Biological Processregulation of cyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0000307Cellular Componentcyclin-dependent protein kinase holoenzyme complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016538Molecular Functioncyclin-dependent protein serine/threonine kinase regulator activityInterproscan
GO:0044772Biological Processmitotic cell cycle phase transitionInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16483POC5; centrosomal protein POC5-Chromosome and associated proteinsko03036deepkoala

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