Detailed information of g75.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBG56572.1, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Deltaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B0UV084-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Histophilus somni (strain 2336) OX=228400 GN=ispH PE=3 SV=1
P579604-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pasteurella multocida (strain Pm70) OX=272843 GN=ispH PE=3 SV=1
A5UID94-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Haemophilus influenzae (strain PittGG) OX=374931 GN=ispH PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02401LYTBLytB proteinFamilyInterproscan
PF00047igImmunoglobulin domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17857AAA_lid_1AAA+ lid domainDomainInterproscan
PF12775AAA_7P-loop containing dynein motor regionDomainInterproscan
PF12781AAA_9ATP-binding dynein motor regionDomainInterproscan
PF12777MTMicrotubule-binding stalk of dynein motorDomainInterproscan
PF12780AAA_8P-loop containing dynein motor region D4DomainInterproscan
PF08393DHC_N2Dynein heavy chain, N-terminal region 2FamilyInterproscan
PF17852Dynein_AAA_lidDynein heavy chain AAA lid domainDomainInterproscan
PF12774AAA_6Hydrolytic ATP binding site of dynein motor regionDomainInterproscan
PF08190PIH1PIH1 N-terminal domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF10228HPF1Histone PARylation factor 1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003451Family4-hydroxy-3-methylbut-2-enyl diphosphate reductaseInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013151DomainImmunoglobulinInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR051275FamilyCellular adhesion and signaling domain-containing proteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR042222Homologous_superfamilyDynein heavy chain, domain 2, N-terminalInterproscan
IPR043157Homologous_superfamilyDynein heavy chain, AAA1 domain, small subdomainInterproscan
IPR041589DomainDynein heavy chain 3, AAA+ lid domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035706DomainDynein heavy chain, ATP-binding dynein motor regionInterproscan
IPR042228Homologous_superfamilyDynein heavy chain, linker, subdomain 3Interproscan
IPR024743DomainDynein heavy chain, coiled coil stalkInterproscan
IPR024317DomainDynein heavy chain, AAA module D4Interproscan
IPR013602DomainDynein heavy chain, linkerInterproscan
IPR041466DomainDynein heavy chain, AAA 5 extension domainInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR035699DomainDynein heavy chain, hydrolytic ATP-binding dynein motor regionInterproscan
IPR050734FamilyPIH1 family, Kintoun subfamilyInterproscan
IPR012981DomainPIH1, N-terminalInterproscan
IPR001314FamilyPeptidase S1A, chymotrypsin familyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR018114Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR050127FamilySerine Proteases (Peptidase S1 Family)Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR019361FamilyHistone PARylation factor 1Interproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR304264-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASEInterproscan
PTHR11640NEPHRINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45703DYNEIN HEAVY CHAINInterproscan
PTHR22997UNCHARACTERIZEDInterproscan
PTHR24264TRYPSIN-RELATEDInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13386HISTONE PARYLATION FACTOR 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0019288Biological Processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathwayInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0050992Biological Processdimethylallyl diphosphate biosynthetic processInterproscan
GO:0051745Molecular Function4-hydroxy-3-methylbut-2-enyl diphosphate reductase activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0000492Biological Processbox C/D snoRNP assemblyInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0097255Cellular ComponentR2TP complexInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0010835Biological Processregulation of protein ADP-ribosylationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0072572Molecular Functionpoly-ADP-D-ribose bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03527ispH, lytB; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductaseEC:1.17.7.4
Terpenoid backbone biosynthesisko00900deepkoala

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