Gene detail

Detailed information of g752.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_031550035.1, ORC ubiquitin ligase 1-like isoform X1 [Actinia tenebrosa]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5W0B1	ORC ubiquitin ligase 1 OS=Homo sapiens OX=9606 GN=OBI1 PE=1 SV=1
Q8K2Y0	ORC ubiquitin ligase 1 OS=Mus musculus OX=10090 GN=Obi1 PE=1 SV=2
Q5RD97	ORC ubiquitin ligase 1 OS=Pongo abelii OX=9601 GN=OBI1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000015 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000033 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000425 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0000769 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0001978 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0005605 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0006245 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0007550 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0013022 (this species only) · gene tree & orthology
Orthogroup (gene family)	OG0013549 (this species only) · gene tree & orthology
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF05380 all species →	Peptidase_A17	Pao retrotransposon peptidase	Family	Interproscan
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan
PF13923 all species →	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF05024 all species →	Gpi1	N-acetylglucosaminyl transferase component (Gpi1)	Family	Interproscan
PF03982 all species →	DAGAT	Diacylglycerol acyltransferase	Family	Interproscan
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan
PF19424 all species →	UNC80	Protein UNC80 central region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR008042 all species →	Family	Retrotransposon, Pao	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR050198 all species →	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR039209 all species →	Family	ORC ubiquitin ligase 1	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR007720 all species →	Family	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q/GPI1	Interproscan
IPR007130 all species →	Family	Diacylglycerol acyltransferase	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR042869 all species →	Family	Rho GTPase-activating protein 11	Interproscan
IPR045852 all species →	Domain	Protein UNC80, central region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33332 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR22955 all species →	RETROTRANSPOSON	Interproscan
PTHR24418 all species →	TYROSINE-PROTEIN KINASE	Interproscan
PTHR14609 all species →	RING FINGER PROTEIN 219	Interproscan
PTHR21329 all species →	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT Q-RELATED	Interproscan
PTHR12317 all species →	DIACYLGLYCEROL O-ACYLTRANSFERASE	Interproscan
PTHR15670 all species →	RHO GTPASE ACTIVATING PROTEIN 11A	Interproscan
PTHR31781 all species →	UNC80	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004715 all species →	Molecular Function	non-membrane spanning protein tyrosine kinase activity	Interproscan
GO:0005102 all species →	Molecular Function	signaling receptor binding	Interproscan
GO:0007169 all species →	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0030154 all species →	Biological Process	cell differentiation	Interproscan
GO:0031234 all species →	Cellular Component	extrinsic component of cytoplasmic side of plasma membrane	Interproscan
GO:0045087 all species →	Biological Process	innate immune response	Interproscan
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0006275 all species →	Biological Process	regulation of DNA replication	Interproscan
GO:0006513 all species →	Biological Process	protein monoubiquitination	Interproscan
GO:0006506 all species →	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0008374 all species →	Molecular Function	O-acyltransferase activity	Interproscan
GO:0004144 all species →	Molecular Function	diacylglycerol O-acyltransferase activity	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0019432 all species →	Biological Process	triglyceride biosynthetic process	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0030424 all species →	Cellular Component	axon	Interproscan
GO:0034703 all species →	Cellular Component	cation channel complex	Interproscan
GO:0055080 all species →	Biological Process	monoatomic cation homeostasis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05704	SRC; tyrosine-protein kinase Src	EC:2.7.10.2	Membrane trafficking	ko04131	deepkoala
K11137	TELO2, TEL2; telomere length regulation protein	-	DNA repair and recombination proteins	ko03400	deepkoala
K25644	CABCOCO1; ciliary-associated calcium-binding coiled-coil protein 1	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.