Detailed information of g7535.t1.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_025741972.1, DNA polymerase beta isoform X3 [Callorhinus ursinus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P06746DNA polymerase beta OS=Homo sapiens OX=9606 GN=POLB PE=1 SV=3
Q27958DNA polymerase beta OS=Bos taurus OX=9913 GN=POLB PE=2 SV=3
Q8K409DNA polymerase beta OS=Mus musculus OX=10090 GN=Polb PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF14716HHH_8Helix-hairpin-helix domainDomainInterproscan
PF14792DNA_pol_B_palmDNA polymerase beta palm DomainInterproscan
PF14520HHH_5Helix-hairpin-helix domainDomainInterproscan
PF14791DNA_pol_B_thumbDNA polymerase beta thumb FamilyInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002054DomainDNA-directed DNA polymerase XInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR037160Homologous_superfamilyDNA polymerase, thumb domain superfamilyInterproscan
IPR022312FamilyDNA polymerase family XInterproscan
IPR010996DomainDNA polymerase beta-like, N-terminal domainInterproscan
IPR027421Homologous_superfamilyDNA polymerase lambda lyase domain superfamilyInterproscan
IPR028207DomainDNA polymerase beta, palm domainInterproscan
IPR003583DomainHelix-hairpin-helix DNA-binding motif, class 1Interproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR029398DomainDNA polymerase beta, thumb domainInterproscan
IPR002008FamilyDNA polymerase family X, beta-likeInterproscan
IPR023780DomainChromo domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan

TOP