Detailed information of g760.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAF4627905.1, hypothetical protein G7Y89_g10247 [Cudoniella acicularis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K194U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Mus musculus OX=10090 GN=Snrnp27 PE=1 SV=1
Q8WVK2U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP27 PE=1 SV=1
Q6DDA4U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Xenopus tropicalis OX=8364 GN=snrnp27 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20209DUF6570Domain of unknown function (DUF6570)DomainInterproscan
PF17751SKICHSKICH domainDomainInterproscan
PF08648SNRNP27U4/U6.U5 small nuclear ribonucleoproteinsFamilyInterproscan
PF01753zf-MYNDMYND fingerDomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF12068PH_RBDRab-binding domain (RBD)DomainInterproscan
PF00685Sulfotransfer_1Sulfotransferase domainDomainInterproscan
PF03712Cu2_monoox_CCopper type II ascorbate-dependent monooxygenase, C-terminal domainDomainInterproscan
PF08449UAAUAA transporter familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042618FamilyDynein regulatory complex protein 9Interproscan
IPR046700DomainDomain of unknown function DUF6570Interproscan
IPR041611DomainSKICH domainInterproscan
IPR051002FamilyUbiquitin-binding and autophagy-associated domain-containing proteinInterproscan
IPR013957DomainU4/U6.U5 small nuclear ribonucleoprotein 27kDa proteinInterproscan
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR052110FamilyER-Golgi Transport and Cell Adhesion RegulatorInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR021935DomainSmall G protein signalling modulator 1/2, Rab-binding domainInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR037359FamilyHeparan sulfate sulfotransferaseInterproscan
IPR000863DomainSulfotransferase domainInterproscan
IPR024548DomainCopper type II ascorbate-dependent monooxygenase, C-terminalInterproscan
IPR008977Homologous_superfamilyPHM/PNGase F domain superfamilyInterproscan
IPR014784Homologous_superfamilyCopper type II, ascorbate-dependent monooxygenase-like, C-terminalInterproscan
IPR000945FamilyDopamine beta-hydroxylase-likeInterproscan
IPR013657FamilySLC35B1-4/HUT1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14871DYNEIN REGULATORY COMPLEX PROTEIN 9Interproscan
PTHR31915SKICH DOMAIN-CONTAINING PROTEINInterproscan
PTHR31077U4/U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEINInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR23104MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEINInterproscan
PTHR10605HEPARAN SULFATE SULFOTRANSFERASEInterproscan
PTHR10157DOPAMINE BETA HYDROXYLASE RELATEDInterproscan
PTHR10778SOLUTE CARRIER FAMILY 35 MEMBER BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0031514Cellular Componentmotile ciliumInterproscan
GO:0044782Biological Processcilium organizationInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0008380Biological ProcessRNA splicingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0008146Molecular Functionsulfotransferase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0016715Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygenInterproscan
GO:0004500Molecular Functiondopamine beta-monooxygenase activityInterproscan
GO:0005507Molecular Functioncopper ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006589Biological Processoctopamine biosynthetic processInterproscan
GO:0030667Cellular Componentsecretory granule membraneInterproscan
GO:0042420Biological Processdopamine catabolic processInterproscan
GO:0042421Biological Processnorepinephrine biosynthetic processInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005459Molecular FunctionUDP-galactose transmembrane transporter activityInterproscan
GO:0005460Molecular FunctionUDP-glucose transmembrane transporter activityInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0030173Cellular Componentobsolete integral component of Golgi membraneInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0072334Biological ProcessUDP-galactose transmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21347TAX1BP1; Tax1-binding protein 1-Spliceosomeko03041deepkoala
Membrane traffickingko04131deepkoala
Mitochondrial biogenesisko03029deepkoala

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