Gene detail

Detailed information of g7606.t1 in Acropora digitifera

Genomic Location: chr3Alt:33011551...33019226
NR annotation: XP_044173304.1, uncharacterized protein LOC114955871 isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g7606.t1

ATGGCCCACCAGCCAACCCATCGAGAAGCTTCCTTTACGCTTGGCAGCTTCCGAGAAGCCTTGGAAAAGCACGAGAAAGAGTTGGACATTGCCAGGAAAGCCGGCGACCAGGTTAGAGAAGGAAATGCCTATGTCAGTCTTGGGACAGCTTACCACTCCCTCAGTGATTTTCCGAAAGCTGTCGAGTGTTACGAGAAGAGTTTGAACTTTTACAGGAAAGCAGGCGACCGGGCTGGAGAAGGAGCTGCCTATTTGAATCTTGGGGTAGCTTACGACTACCACAGCAATTTTCCGAAAGCTATCGAGTGTAATGAAGAGAGTTTGAAAATTGCCTGGGAAGCAGGTGACCTGGTTTTAGAAGGAGATGCCTATTTGAATCTTGGAAACGTTTACAAGTTGCAGAGCAATTTTCCTAAAGCTATCGAGTGTTACAAAAAGAGTTTGAACAGTGCTAGGGGAGCAGGAGACAGAGGTAGAGAAGGAGATGCAAATTTCAGTCTTGGGAACGCTTACAAGTCCCACAGCGATTTTCCAAACGCTGTCGCCTGTTATGAAGAGTGTTTGAACATTGCCAGAAAAGAAGGCGACCAGGCTGCAGAAGGAGATGCCTATTTGAATCTTGGGATCATTTACGACTCCCAGAGCGATTTTTCAAAAGCTATCAAGTGTTATGAAAAGCTATTGAGTATTGCCTGGGAAGCAGGCGACGGGGCAAGAGAGGGAAGAGCCTATTTCAATCTTGGAACAGCTTACCACTCTCTCAGTGATTTTCCCAATGCTATCGAGTGTTATAAAAACAGTTTGAACATTGCTAGGGAAGCAGGCGACTGGTCTACAGAAGAGGATGCCTGTTTCAATCTTGGGATCGCTTACCACTCCCACAGCGATTTTCCCAAAGCTGTCGAGTGTTTCGAGACGAGTTTGAACTTTTCCAGGGAAGCAGGCGACCGGGCTAGGGAAGGAAATGCCTATTTGAATCTTGGGATGACTTACGACTCCTGCGGCGATTTTCTGAAAGCTATCGGATGTTATGAAAAGAGTTTGGACATTGCCAGGGAAGCAGGCGACCGGGCTATAGAAGGAGATGCCTATTTGAATCTTGGGAGAGCTTACGACTCCCACGGCAATTCTGCGAAAGCTATCGAGTGTTATGAAAAGAGTTTGAAGATTTCCAATGCAGAAAAGAAACCAGCCGACAATATACCCGTGACTCCTCCTGAAATTAATCTACGTGGTCCCAGGGCCTTGGAGGCTTATAAAAAGGCCCTAACAGACGGTAAAACTCGGCTAAAAAGGTTTCCGATCATGTTGATTGGACAGGACCGTTCAGGAAAAACCAGCCTAAAGAAGTCACTCCAGGGATTGCAATTCAACGCACATGAAGATAGCACTGTTGGGATAGATGTTGATCCGTCGTACTTTAAAGTGACCACTGAGATTTGGAAGACAGGGAAGAGGGATCAAGCAGCAAGCAAAGAGGAAAAGGCGGCTTCTTTTGAGCATCGTGTAGCTCGCGTAGTTGTTGAAAATCTAAGGGAACAAGGATTGGCTCCTGATGTAAAAGCTGTCAACAAAAGATGTAGTGGAACATCAAAAGATGTTGAAGGTTCCTCTGAGATCTCCAAAAAGGCTCAAATTTTGAATGAACCCAATGAAAACCCCGCGGATTACCAAGTTCCTGATCCTGCATACAGAGCAGAAGGTGCAAATTCTTCATCCAGTGCTGAACACCTGGACGATGACAGTCAAATCGATGAGGCACCGACGAAGGCCAGAGATAACAGCGTTTCCCCTGTAATGATACCTTTAGAGATAGCAACGTTGATTAAGAAATTGCGAGATGAAGTTGACAAGTTGGGAAGTGAAGATGACATCTATTCAGTTTTGTGGGATTTTGCCGGAGAATCAGTTTATTACGAGACTCATCAACTCTTTCTCACCTCAAAGGCAATCTACCTTTTGGTTTATGACCTAAGCCGAGATCCTAACGAAAGTGGAAAGCCCGTGAAAACGCATGGAGTGTTTGAGAAAATTGAAGAGACGTTTACCAAAACTAACCTCGAGTATCTAGACTTTTGGATGACTACGGTTTCTTCACAATCTAGTCGAATTGAAGATCACGATCTGAACTCGGCATCGACATCAAAACTTCTCCCGAAAAGAGTTCCTCCTGTCTTCTTGCTATACGATGATGTGTTTGTAGTCGATAATACTAAATCAGGCATGCAAATGGAGTGCTCAGAAGTGCATCGCCTGCGAGAAAATATTTTGGATGTTGCCAAGGAGCTACCGCACACGAGAGAAGATATTCCAATCAAGTGGTTAAAGTATGAAAAAGCGCTCCAGGTCATACTAGCTGAAGGCCATAAGTGCATCATTATTGAGCATGCCGAACAGATCGCATCTGAAGTCTGTCAAATTGGAGACCATCAAGAATTTGTAACGATGCTTGACTTTTTGCACGATCAGAGAATTTTAATACATTTTGATGAGACCGTTGAGTTAAACAAGTTAGTTGTGCTGGATCCTCAATGGTTGATCGATGTGTTCAAGGCAGTAATAACGGTAAAGCCTTTTCACCAACATGAAAGGGGGTTCAAAGGTATGTGGCTCAAGCTGGAAAGATATGGAATCCTGGACGAAAAACTCCTCCGGCATGCGTGGGGCCAAATTGTTGAAGAACATCACACCTTTGAAAGCCTCATCGCAATCATGGAGAAGTTCAGCTTGTTGTGCTCTTGGTCTTCATCTGATGAGCCATGTAGTAAGAAGTATCTGGTGCCGTCCATGTTGAGGTGCCATCCACCACAGGAGATCACCAAATTGATTGCCTCGGCAAGACTCCCTTCCGTTTTCCTCAAGTTTGAATCTGGTCAAGTTCCATCAAATCTGTTCCCACGACTTGTGACCCAATTCCTTCAGTGGGGGAAAAATGAATTTTGGAGCACAGCAAATCCTCAGCTGTATAAGAATTTCGCCAGATTTTACACCGCTGAAGACGAAAACTGTTCAGTTTTACTCTTATGCCATTCCTCTTTAATTGAAATCGTTGTTCATGGAGGGAATGTTCGTCCGCTAAAGGATGACTTGCAGGTAGATTTAAGCATTTCATGCGGAGATCAACTCGATTCATTTGAAGTGTTCTGTGCTCGTGAAGTTTACAGACAGCTCGTGTTGTTGTTTGAGTGCTTGCGTAAAGAGTTTTGTTGGTTGAAGAGAATGAAATATCAAGCTGGGGTGATTTGTCCAGTTTGTTGCCATAAGAGGCTTGTCAAGTATTGCCCCACTCATCACAAGCAAGATTGTGAGCGGGAAGAATGTCTTCATTTCATACGTGAGTTAGAGCTGCGCAATGCAAATCACGCTATCACCTGCACCAGGTCGGCTGTTGCAGTAGATAAAGTTTGCATCAAAGATTTTTCAGCATGGTTTGCTAGTCCACGTAAAGAAATAACAAGCGATGCAAATGGCGGCACAAGAGAGAGTAAAGAGAAGTCACTTGCTCTTCCTGGCAAAGTCGTTGAATCACTAGTGTCGCCGTTATGTGATGCAAAAGAAATTGTACTTCATCTGAAAGAAAACCTTCATTTGGATCAAACGGATTTGGAGAAACCCACCCCGGAAACAACGCGAATGATCCGTTGCCTTATGGCAAAAGCTAAGGATTCAAACCGGATCGATGTTGTCAAACTCTTGAGAGAAATTGCTCCAGCAGGGACCACTGGTCCATTATTGCCTGGGAAACTTGATATTTGTGATATTCCAGTTAAAAATAGGAGAGATCTTACAATAGATTTGACCGTAGGAGGCAGGTGGAAAGTTGTTGCCGAGAGACTGGGCTTGAGGGGAAGTGAGATCGAGTTTCTTGATGAGAGATACCCGAATCCAAGCGAAGCGACTTTGGCCTTTGTGGCTCATTACTATGGCATGAATGTGGATTACCTGTACGATGTGTTAACTGAGTGTGGGATGCCTGTGCTGGCTGATTTTTTGTGA

Transcript

chr3Alt.g7606.t1

ATCGAAGGGGATTTCCATCTTAAAATCAATTAAATATATTTGGGAAACCGTTTCACATTAATCAAGAAGATTGTCAAGAACATGGCCCACCAGCCAACCCATCGAGAAGCTTCCTTTACGCTTGGCAGCTTCCGAGAAGCCTTGGAAAAGCACGAGAAAGAGTTGGACATTGCCAGGAAAGCCGGCGACCAGGTTAGAGAAGGAAATGCCTATGTCAGTCTTGGGACAGCTTACCACTCCCTCAGTGATTTTCCGAAAGCTGTCGAGTGTTACGAGAAGAGTTTGAACTTTTACAGGAAAGCAGGCGACCGGGCTGGAGAAGGAGCTGCCTATTTGAATCTTGGGGTAGCTTACGACTACCACAGCAATTTTCCGAAAGCTATCGAGTGTAATGAAGAGAGTTTGAAAATTGCCTGGGAAGCAGGTGACCTGGTTTTAGAAGGAGATGCCTATTTGAATCTTGGAAACGTTTACAAGTTGCAGAGCAATTTTCCTAAAGCTATCGAGTGTTACAAAAAGAGTTTGAACAGTGCTAGGGGAGCAGGAGACAGAGGTAGAGAAGGAGATGCAAATTTCAGTCTTGGGAACGCTTACAAGTCCCACAGCGATTTTCCAAACGCTGTCGCCTGTTATGAAGAGTGTTTGAACATTGCCAGAAAAGAAGGCGACCAGGCTGCAGAAGGAGATGCCTATTTGAATCTTGGGATCATTTACGACTCCCAGAGCGATTTTTCAAAAGCTATCAAGTGTTATGAAAAGCTATTGAGTATTGCCTGGGAAGCAGGCGACGGGGCAAGAGAGGGAAGAGCCTATTTCAATCTTGGAACAGCTTACCACTCTCTCAGTGATTTTCCCAATGCTATCGAGTGTTATAAAAACAGTTTGAACATTGCTAGGGAAGCAGGCGACTGGTCTACAGAAGAGGATGCCTGTTTCAATCTTGGGATCGCTTACCACTCCCACAGCGATTTTCCCAAAGCTGTCGAGTGTTTCGAGACGAGTTTGAACTTTTCCAGGGAAGCAGGCGACCGGGCTAGGGAAGGAAATGCCTATTTGAATCTTGGGATGACTTACGACTCCTGCGGCGATTTTCTGAAAGCTATCGGATGTTATGAAAAGAGTTTGGACATTGCCAGGGAAGCAGGCGACCGGGCTATAGAAGGAGATGCCTATTTGAATCTTGGGAGAGCTTACGACTCCCACGGCAATTCTGCGAAAGCTATCGAGTGTTATGAAAAGAGTTTGAAGATTTCCAATGCAGAAAAGAAACCAGCCGACAATATACCCGTGACTCCTCCTGAAATTAATCTACGTGGTCCCAGGGCCTTGGAGGCTTATAAAAAGGCCCTAACAGACGGTAAAACTCGGCTAAAAAGGTTTCCGATCATGTTGATTGGACAGGACCGTTCAGGAAAAACCAGCCTAAAGAAGTCACTCCAGGGATTGCAATTCAACGCACATGAAGATAGCACTGTTGGGATAGATGTTGATCCGTCGTACTTTAAAGTGACCACTGAGATTTGGAAGACAGGGAAGAGGGATCAAGCAGCAAGCAAAGAGGAAAAGGCGGCTTCTTTTGAGCATCGTGTAGCTCGCGTAGTTGTTGAAAATCTAAGGGAACAAGGATTGGCTCCTGATGTAAAAGCTGTCAACAAAAGATGTAGTGGAACATCAAAAGATGTTGAAGGTTCCTCTGAGATCTCCAAAAAGGCTCAAATTTTGAATGAACCCAATGAAAACCCCGCGGATTACCAAGTTCCTGATCCTGCATACAGAGCAGAAGGTGCAAATTCTTCATCCAGTGCTGAACACCTGGACGATGACAGTCAAATCGATGAGGCACCGACGAAGGCCAGAGATAACAGCGTTTCCCCTGTAATGATACCTTTAGAGATAGCAACGTTGATTAAGAAATTGCGAGATGAAGTTGACAAGTTGGGAAGTGAAGATGACATCTATTCAGTTTTGTGGGATTTTGCCGGAGAATCAGTTTATTACGAGACTCATCAACTCTTTCTCACCTCAAAGGCAATCTACCTTTTGGTTTATGACCTAAGCCGAGATCCTAACGAAAGTGGAAAGCCCGTGAAAACGCATGGAGTGTTTGAGAAAATTGAAGAGACGTTTACCAAAACTAACCTCGAGTATCTAGACTTTTGGATGACTACGGTTTCTTCACAATCTAGTCGAATTGAAGATCACGATCTGAACTCGGCATCGACATCAAAACTTCTCCCGAAAAGAGTTCCTCCTGTCTTCTTGCTATACGATGATGTGTTTGTAGTCGATAATACTAAATCAGGCATGCAAATGGAGTGCTCAGAAGTGCATCGCCTGCGAGAAAATATTTTGGATGTTGCCAAGGAGCTACCGCACACGAGAGAAGATATTCCAATCAAGTGGTTAAAGTATGAAAAAGCGCTCCAGGTCATACTAGCTGAAGGCCATAAGTGCATCATTATTGAGCATGCCGAACAGATCGCATCTGAAGTCTGTCAAATTGGAGACCATCAAGAATTTGTAACGATGCTTGACTTTTTGCACGATCAGAGAATTTTAATACATTTTGATGAGACCGTTGAGTTAAACAAGTTAGTTGTGCTGGATCCTCAATGGTTGATCGATGTGTTCAAGGCAGTAATAACGGTAAAGCCTTTTCACCAACATGAAAGGGGGTTCAAAGGTATGTGGCTCAAGCTGGAAAGATATGGAATCCTGGACGAAAAACTCCTCCGGCATGCGTGGGGCCAAATTGTTGAAGAACATCACACCTTTGAAAGCCTCATCGCAATCATGGAGAAGTTCAGCTTGTTGTGCTCTTGGTCTTCATCTGATGAGCCATGTAGTAAGAAGTATCTGGTGCCGTCCATGTTGAGGTGCCATCCACCACAGGAGATCACCAAATTGATTGCCTCGGCAAGACTCCCTTCCGTTTTCCTCAAGTTTGAATCTGGTCAAGTTCCATCAAATCTGTTCCCACGACTTGTGACCCAATTCCTTCAGTGGGGGAAAAATGAATTTTGGAGCACAGCAAATCCTCAGCTGTATAAGAATTTCGCCAGATTTTACACCGCTGAAGACGAAAACTGTTCAGTTTTACTCTTATGCCATTCCTCTTTAATTGAAATCGTTGTTCATGGAGGGAATGTTCGTCCGCTAAAGGATGACTTGCAGGTAGATTTAAGCATTTCATGCGGAGATCAACTCGATTCATTTGAAGTGTTCTGTGCTCGTGAAGTTTACAGACAGCTCGTGTTGTTGTTTGAGTGCTTGCGTAAAGAGTTTTGTTGGTTGAAGAGAATGAAATATCAAGCTGGGGTGATTTGTCCAGTTTGTTGCCATAAGAGGCTTGTCAAGTATTGCCCCACTCATCACAAGCAAGATTGTGAGCGGGAAGAATGTCTTCATTTCATACGTGAGTTAGAGCTGCGCAATGCAAATCACGCTATCACCTGCACCAGGTCGGCTGTTGCAGTAGATAAAGTTTGCATCAAAGATTTTTCAGCATGGTTTGCTAGTCCACGTAAAGAAATAACAAGCGATGCAAATGGCGGCACAAGAGAGAGTAAAGAGAAGTCACTTGCTCTTCCTGGCAAAGTCGTTGAATCACTAGTGTCGCCGTTATGTGATGCAAAAGAAATTGTACTTCATCTGAAAGAAAACCTTCATTTGGATCAAACGGATTTGGAGAAACCCACCCCGGAAACAACGCGAATGATCCGTTGCCTTATGGCAAAAGCTAAGGATTCAAACCGGATCGATGTTGTCAAACTCTTGAGAGAAATTGCTCCAGCAGGGACCACTGGTCCATTATTGCCTGGGAAACTTGATATTTGTGATATTCCAGTTAAAAATAGGAGAGATCTTACAATAGATTTGACCGTAGGAGGCAGGTGGAAAGTTGTTGCCGAGAGACTGGGCTTGAGGGGAAGTGAGATCGAGTTTCTTGATGAGAGATACCCGAATCCAAGCGAAGCGACTTTGGCCTTTGTGGCTCATTACTATGGCATGAATGTGGATTACCTGTACGATGTGTTAACTGAGTGTGGGATGCCTGTGCTGGCTGATTTTTTGTGATTTGAGGTCTACCTAACAGTTCTTCTTGAAGCCTGGATCTGTTTGAACCAGCGTTTTTGAGGAAGCCTCTTCAGCAGTATGACTACTGGGTTAGTTCTATGTTGTCATCTTACAGCAACCTATGAGTAGGTGTATGTCGCCTGTATATTAACCTTATCTTAATTTTAATACGTAACATTGTAAAAGGTTTTAAACAATGGCACAAAGAATAAGAATGGAATGAATTGCTGATCAAAATACATTTCCAATGAAGATTTTTTTGACGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q55E58	Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum OX=44689 GN=pats1 PE=3 SV=1
Q6XHB2	Probable serine/threonine-protein kinase roco4 OS=Dictyostelium discoideum OX=44689 GN=roco4 PE=1 SV=1
Q8SSS9	Probable serine/threonine-protein kinase qkgA OS=Dictyostelium discoideum OX=44689 GN=qkgA-1 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF16095 all species →	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR052699 all species →	Family	Regulatory & Mitotic Spindle Associated	Interproscan
IPR006597 all species →	Repeat	Sel1-like repeat	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR032171 all species →	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10098 all species →	RAPSYN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g7606.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.