Gene detail

Detailed information of g764.t1 in Montipora capitata

Genomic Location: Sc0000008:44317...48044
NR annotation: XP_044179976.1, DNA polymerase alpha catalytic subunit-like isoform X2 [Acropora millepora]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DE46	DNA polymerase alpha catalytic subunit OS=Xenopus laevis OX=8355 GN=pola1 PE=1 SV=1
O89042	DNA polymerase alpha catalytic subunit (Fragment) OS=Rattus norvegicus OX=10116 GN=Pola1 PE=1 SV=1
P33609	DNA polymerase alpha catalytic subunit OS=Mus musculus OX=10090 GN=Pola1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001755 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12254 all species →	DNA_pol_alpha_N	DNA polymerase alpha subunit p180 N terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024647 all species →	Domain	DNA polymerase alpha catalytic subunit, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45861 all species →	DNA POLYMERASE ALPHA CATALYTIC SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0003688 all species →	Molecular Function	DNA replication origin binding	Interproscan
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0005658 all species →	Cellular Component	alpha DNA polymerase:primase complex	Interproscan
GO:0006272 all species →	Biological Process	leading strand elongation	Interproscan
GO:0006273 all species →	Biological Process	lagging strand elongation	Interproscan
GO:1902975 all species →	Biological Process	mitotic DNA replication initiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g764.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.